Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.54□□□□□ -2
PTPDC1A2A3K4 MIR6079-201ENST00000635807 62 ntBASIC2.54□□□□□ -2
PTPDC1A2A3K4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.53□□□□□ -2
PTPDC1A2A3K4 Y_RNA.75-201ENST00000362927 97 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 RNA5SP465-201ENST00000391195 109 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 MIR1283-2-201ENST00000408621 87 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 AL163195.1-201ENST00000496941 348 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 SCARNA8-201ENST00000515924 131 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 RNU6-237P-201ENST00000515985 71 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.53□□□□□ -2
PTPDC1A2A3K4 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.53□□□□□ -2
PTPDC1A2A3K4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
PTPDC1A2A3K4 RNU4-41P-201ENST00000364426 143 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 RNU6-312P-201ENST00000364629 107 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 RNU1-52P-201ENST00000384190 164 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 SNORA67.3-201ENST00000384366 140 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 MIR597-201ENST00000384968 97 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 RNU6-578P-201ENST00000390980 103 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 RNA5SP496-201ENST00000391240 109 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 AL512604.1-201ENST00000404812 257 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 AC245047.8-201ENST00000456455 284 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 RNU6-453P-201ENST00000516819 85 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 MIR2681-201ENST00000581814 105 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 MIR5002-201ENST00000584713 97 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.23-201ENST00000362496 106 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 RNU6-275P-201ENST00000364910 107 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.412-201ENST00000384001 104 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 AL358944.1-201ENST00000528537 144 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 MIR5694-201ENST00000581190 76 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 AC108706.1-201ENST00000611053 297 ntBASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTPDC1A2A3K4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 RNU6-1228P-201ENST00000391014 107 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 MIR1278-201ENST00000408753 81 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 RN7SKP101-201ENST00000411376 320 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 HMGN2P3-201ENST00000433603 273 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 HMGN2P5-201ENST00000436882 273 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 AC233266.1-201ENST00000454518 96 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 RNU6-1212P-201ENST00000517023 104 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 MIR4769-201ENST00000584126 77 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 AC069114.2-201ENST00000604699 304 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 AC242852.1-201ENST00000612151 96 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 AC244015.1-201ENST00000622301 99 ntBASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
PTPDC1A2A3K4 SNORD114-1-201ENST00000362705 72 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.441-201ENST00000384123 112 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 RNY3P5-201ENST00000384127 102 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 MT-TT-201ENST00000387460 66 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 MIR1289-2-201ENST00000408360 111 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 AL021707.8-201ENST00000609428 183 ntBASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PTPDC1A2A3K4 SNORA3A-201ENST00000364113 130 ntBASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 RNU6-1080P-201ENST00000383982 107 ntBASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 SNORA48.3-201ENST00000391081 134 ntBASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 AL606845.1-201ENST00000404881 255 ntBASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 AC109810.1-201ENST00000534066 224 ntBASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 MIR5094-201ENST00000578766 85 ntBASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTPDC1A2A3K4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 AL603908.1-201ENST00000406098 201 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 AC005840.1-201ENST00000498412 377 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 AP002004.2-201ENST00000531656 154 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 AC084364.2-201ENST00000546924 395 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 RPL23AP91-201ENST00000569211 455 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.47□□□□□ -2.01
PTPDC1A2A3K4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 RNU6-394P-201ENST00000410735 107 ntBASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 AC069257.2-201ENST00000441819 155 ntBASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 AC023449.1-201ENST00000454464 154 ntBASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 AC022217.4-201ENST00000604389 163 ntBASIC2.46□□□□□ -2.02
PTPDC1A2A3K4 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 276.1 ms