Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 RNU6-541P-201ENST00000384709 110 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 AC244250.2-201ENST00000418731 148 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 snoU13.2-201ENST00000459201 104 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 AC072046.2-201ENST00000618366 268 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 AC023510.2-201ENST00000622162 746 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 MIR6759-201ENST00000638110 65 ntBASIC-0.84□□□□□ -2.54
TCRBV3S1A0A5B6 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-324P-201ENST00000363957 106 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 RNU4-84P-201ENST00000364200 139 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 RNY4P34-201ENST00000364779 95 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 FCF1P9-201ENST00000412546 282 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 AC009961.2-201ENST00000435771 251 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 AC105029.1-201ENST00000520250 669 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 MIR5706-201ENST00000579841 80 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 AC069431.2-201ENST00000604149 1099 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 AC087683.2-201ENST00000611384 326 ntBASIC-0.85□□□□□ -2.55
TCRBV3S1A0A5B6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 SNORD14E-201ENST00000364009 85 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 SNORA25.7-201ENST00000364375 127 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 RNA5SP205-201ENST00000364653 136 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-281P-201ENST00000384212 103 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 SNORA75.1-201ENST00000391130 148 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 AL031667.1-201ENST00000440222 725 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 MTATP6P26-201ENST00000445926 662 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 MTND4P19-201ENST00000446659 478 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 RNU7-73P-201ENST00000458743 63 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 snoU13.16-201ENST00000459350 104 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 MTCO1P29-201ENST00000496868 288 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 AC138749.4-201ENST00000563970 127 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 NAMPTP3-201ENST00000569273 224 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 POLR3GP1-201ENST00000594073 261 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 MIR6507-201ENST00000613630 70 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 AL138960.2-201ENST00000625145 535 ntBASIC-0.86□□□□□ -2.55
TCRBV3S1A0A5B6 MIR410-201ENST00000362222 80 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-500P-201ENST00000362349 107 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 RNA5SP257-201ENST00000363023 116 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-268P-201ENST00000364174 107 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 SNORA24-201ENST00000384096 131 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 SNORD38B-201ENST00000384690 67 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 MTCO2P16-201ENST00000436962 677 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 AL138752.1-201ENST00000452964 351 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 MTATP6P14-201ENST00000455189 673 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 AC007751.1-201ENST00000529260 376 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 AC096720.1-201ENST00000604441 183 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 AL133215.3-201ENST00000609801 448 ntBASIC-0.87□□□□□ -2.55
TCRBV3S1A0A5B6 SNORA1.2-201ENST00000365189 134 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 RNU6-282P-201ENST00000365357 103 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 MT-TF-201ENST00000387314 71 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 RNU4-83P-201ENST00000410863 133 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 RNU2-72P-201ENST00000411175 163 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 MIR5692C1-201ENST00000585309 91 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 AC125232.2-201ENST00000592457 143 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 AL355297.3-201ENST00000604082 446 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 MIR8055-201ENST00000610739 97 ntBASIC-0.88□□□□□ -2.55
TCRBV3S1A0A5B6 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 RNY3P9-201ENST00000384727 106 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 MIR329-1-201ENST00000385028 80 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 MIR876-201ENST00000401147 81 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 AC236972.2-201ENST00000434979 310 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 AC084290.1-201ENST00000434995 374 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 AC022616.4-201ENST00000522985 181 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 MIR378D2-201ENST00000580636 98 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 AC090616.2-202ENST00000584248 222 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 MIR4424-201ENST00000585257 86 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 U7.6-201ENST00000610841 64 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 AL162376.1-201ENST00000624117 175 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 AC007671.2-201ENST00000637344 619 ntBASIC-0.89□□□□□ -2.55
TCRBV3S1A0A5B6 SNORD93-201ENST00000408813 74 ntBASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 MIR4436A-201ENST00000585278 85 ntBASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 uc_338.28-201ENST00000612082 187 ntBASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 AC010205.1-201ENST00000616668 449 ntBASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 AC103705.1-201ENST00000619013 241 ntBASIC-0.9□□□□□ -2.55
TCRBV3S1A0A5B6 Z97988.1-201ENST00000637697 135 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms