Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SNORA70.12-201ENST00000516084 153 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 AL358944.1-201ENST00000528537 144 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 AL513534.2-201ENST00000603836 250 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 AL008636.1-201ENST00000625038 1018 ntBASIC0.98□□□□□ -2.25
SMIM28A0A1B0GU29 RNU4-79P-201ENST00000362764 141 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.230-201ENST00000364348 109 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 Y_RNA.329-201ENST00000365209 107 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 RNY1P14-201ENST00000384426 108 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 PIGPP3-201ENST00000425307 415 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC010655.3-201ENST00000478818 450 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AL117351.2-201ENST00000513571 157 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 RN7SKP295-201ENST00000517264 153 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC090049.2-201ENST00000550377 109 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC120024.3-201ENST00000603167 156 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 GHRLOS.1-201ENST00000610995 70 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 AL606534.2-204ENST00000635008 178 ntBASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMIM28A0A1B0GU29 SNORD81.1-201ENST00000363064 77 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 SNORD68-201ENST00000363214 84 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 RNU1-115P-201ENST00000365329 160 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.363-201ENST00000365529 113 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.458-201ENST00000384240 102 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AL590004.1-201ENST00000405321 300 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-130P-201ENST00000411112 103 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 MTATP6P23-201ENST00000440153 476 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AC048334.1-201ENST00000477975 159 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 SNORA31.2-201ENST00000516019 134 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 LARP7P1-201ENST00000605576 316 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AL022345.2-201ENST00000606307 135 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AC010205.1-201ENST00000616668 449 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AC007485.1-201ENST00000616755 206 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 AC027335.2-201ENST00000624030 375 ntBASIC0.96□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.39-201ENST00000362620 98 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 U8.5-201ENST00000364528 136 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.253-201ENST00000364562 112 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.508-201ENST00000384502 114 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 MIR548J-201ENST00000408833 112 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.621-201ENST00000411065 96 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 MCFD2P1-201ENST00000417812 300 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 AL160004.2-201ENST00000432935 350 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 AC236972.2-201ENST00000434979 310 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 RPS20P10-201ENST00000451209 253 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 snoU13.25-201ENST00000458945 104 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 AC114811.1-201ENST00000507207 168 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-976P-201ENST00000516086 111 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 DEFB117-201ENST00000602356 141 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 PART1_1.1-201ENST00000611761 217 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 MIR6788-201ENST00000618842 66 ntBASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.95□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.269-201ENST00000364685 89 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 SNORA2.2-201ENST00000365473 135 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 AL451046.2-201ENST00000403074 277 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 RNU4-30P-201ENST00000410245 143 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 AC005042.3-201ENST00000453230 174 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 CYCTP-201ENST00000504253 315 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 SNORA40.14-201ENST00000516543 86 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 MIR3145-201ENST00000580727 82 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 MIR4762-201ENST00000585261 75 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 AL133255.1-201ENST00000606374 441 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 AL096861.1-201ENST00000610899 123 ntBASIC0.94□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.122-201ENST00000363331 96 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-833P-201ENST00000363486 107 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.796-201ENST00000364268 102 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.799-201ENST00000364992 102 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.331-201ENST00000365267 102 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.419-201ENST00000384041 102 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-937P-201ENST00000384325 106 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-308P-201ENST00000390957 107 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-855P-201ENST00000410395 104 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 AL078603.1-201ENST00000603824 313 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 AL080274.1-201ENST00000605565 220 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 AC006157.1-201ENST00000611750 366 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 uc_338.22-201ENST00000622722 187 ntBASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.93□□□□□ -2.26
SMIM28A0A1B0GU29 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.197-201ENST00000364004 102 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.813-201ENST00000364639 102 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.310-201ENST00000365063 113 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.336-201ENST00000365307 109 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-163P-201ENST00000384396 106 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 Y_RNA.509-201ENST00000384506 99 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 MIR522-201ENST00000385071 87 ntBASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
SMIM28A0A1B0GU29 RNU6-910P-201ENST00000390844 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms