Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNY3P3-201ENST00000363816 102 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 RNU6-654P-201ENST00000364373 107 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 SNORD113.3-201ENST00000364630 78 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 RNU6-483P-201ENST00000384088 108 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 MIR136-201ENST00000385207 82 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 RNU6-1304P-201ENST00000411374 106 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 SUMO1P2-201ENST00000452524 304 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 RNU7-43P-201ENST00000516554 64 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 SNORA18.7-201ENST00000516910 131 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 OSBPL9P5-201ENST00000542581 171 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 AC093027.1-201ENST00000546698 429 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 MIR3942-201ENST00000585264 109 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 AF250324.2-201ENST00000608299 610 ntBASIC0.21□□□□□ -2.38
USH1CQ9Y6N9 AC090625.1-201ENST00000357130 210 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 MIR1-1-201ENST00000362147 71 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 RNU6-874P-201ENST00000362390 105 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 RNU6-1059P-201ENST00000363752 98 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 MIR1197-201ENST00000408818 88 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 RNA5SP127-201ENST00000411051 133 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 ELOCP24-201ENST00000456370 334 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 SNORA25.10-201ENST00000515926 124 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 RNU6-1281P-201ENST00000516223 105 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.706-201ENST00000516933 99 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 Z99129.1-201ENST00000612510 255 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 AC104260.1-201ENST00000616660 539 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 AL109933.3-201ENST00000619095 188 ntBASIC0.2□□□□□ -2.38
USH1CQ9Y6N9 SNORA2B-201ENST00000384583 137 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 MIR522-201ENST00000385071 87 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 RNU6-332P-201ENST00000391193 108 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 RNU6-613P-201ENST00000410412 108 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.621-201ENST00000411065 96 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 DLGAP5P1-201ENST00000430307 464 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 MTND1P4-201ENST00000435196 415 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 SNORD5.1-201ENST00000458800 75 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 AC105313.1-201ENST00000509121 353 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 RNU6-864P-201ENST00000516256 108 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.704-201ENST00000516851 102 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 NBR2-204ENST00000587322 63 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 AC104695.3-201ENST00000604052 296 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 RN7SKP299-201ENST00000606679 301 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 AC245008.1-201ENST00000608123 476 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 MIR3674-201ENST00000636576 68 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 MIR3974-201ENST00000637126 96 ntBASIC0.19□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.38-201ENST00000362617 102 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 RNY1P16-201ENST00000363063 111 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 SNORD115-30-201ENST00000364117 82 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.364-201ENST00000365532 101 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 RNU6-318P-201ENST00000384283 103 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 MIR15B-201ENST00000385045 98 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 MIR190B-201ENST00000401119 79 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 USP9YP30-201ENST00000430729 455 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 MTND1P17-201ENST00000448961 204 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 U8.22-201ENST00000459141 133 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 SNORD123-201ENST00000459473 70 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 RNU6-1088P-201ENST00000516850 104 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 AC105029.1-201ENST00000520250 669 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 MIR4273-201ENST00000582824 84 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 MIR3611-201ENST00000584484 83 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.18□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.168-201ENST00000363740 102 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.253-201ENST00000364562 112 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.557-201ENST00000384680 107 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 MIR573-201ENST00000384964 99 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 RNU6-1148P-201ENST00000410992 104 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 AL390729.2-201ENST00000416137 156 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 RNU6-1337P-201ENST00000516525 95 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 RNU2-12P-201ENST00000517216 168 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 AC005014.2-201ENST00000607795 599 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 MIR1321-201ENST00000637766 79 ntBASIC0.17□□□□□ -2.38
USH1CQ9Y6N9 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.48-201ENST00000362710 103 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 RNU6-580P-201ENST00000365159 107 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.358-201ENST00000365491 99 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 Y_RNA.498-201ENST00000384460 102 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 RNU6-625P-201ENST00000459412 107 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 AC116353.2-201ENST00000505332 712 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 AC010486.3-201ENST00000511602 785 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 SNORA40.9-201ENST00000515895 93 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 SNORD45.4-201ENST00000516629 73 ntBASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.16□□□□□ -2.38
USH1CQ9Y6N9 AC078883.4-201ENST00000623218 367 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms