Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 AP004217.1-201ENST00000480579 346 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-237P-201ENST00000515985 71 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNA5SP320-201ENST00000516263 124 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1146P-201ENST00000516282 102 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.686-201ENST00000516548 134 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-667P-201ENST00000517186 102 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 MIR7843-201ENST00000622274 79 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 AC245060.5-201ENST00000610778 3293 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 U8.2-201ENST00000363156 134 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.796-201ENST00000364268 102 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.799-201ENST00000364992 102 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.584-201ENST00000391090 114 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 AC092427.1-202ENST00000430569 476 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1096P-201ENST00000517089 102 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 AC073413.2-201ENST00000604332 360 ntBASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNCAIPQ9Y6H5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SNCAIPQ9Y6H5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 Y_RNA.353-201ENST00000365440 108 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 MIR592-201ENST00000384959 97 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 SNORA26.7-201ENST00000391288 122 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 RPS29P6-201ENST00000438196 145 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 AC233266.1-201ENST00000454518 96 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 AC011406.1-201ENST00000512440 370 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 RNA5SP385-201ENST00000515947 110 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 RNU6-1041P-201ENST00000516254 102 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 RPPH1-2P-201ENST00000516688 293 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 U7.2-201ENST00000607576 63 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 AC242852.1-201ENST00000612151 96 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 JPX_2.1-201ENST00000614161 69 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 Pinc.1-201ENST00000616452 154 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 AC244015.1-201ENST00000622301 99 ntBASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNCAIPQ9Y6H5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 RNU6-978P-201ENST00000364371 103 ntBASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 Y_RNA.273-201ENST00000364703 102 ntBASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 RPS15AP28-201ENST00000435088 386 ntBASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 SNORD11-201ENST00000459124 84 ntBASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 SNORD77.4-201ENST00000516158 81 ntBASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.07□□□□□ -1.92
SNCAIPQ9Y6H5 snoU2-30.2-201ENST00000362805 70 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 Y_RNA.91-201ENST00000363042 107 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 Y_RNA.634-201ENST00000364811 113 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 RNA5SP125-201ENST00000364843 120 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 MIR520G-201ENST00000385064 90 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 AL160236.1-201ENST00000556317 195 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 AC007229.1-201ENST00000590455 412 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 AL449363.1-201ENST00000617815 186 ntBASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SNCAIPQ9Y6H5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 RNU1-96P-201ENST00000364163 162 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 RNU6-461P-201ENST00000364195 107 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 Y_RNA.294-201ENST00000364916 102 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 U8.9-201ENST00000365667 134 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 RNA5SP467-201ENST00000391274 118 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 Z98742.3-201ENST00000418637 326 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 AC003685.2-201ENST00000422795 395 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 AC018868.1-201ENST00000491307 315 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 RNA5SP153-201ENST00000516498 76 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 RNU7-149P-201ENST00000516739 59 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
SNCAIPQ9Y6H5 SNORA25B-201ENST00000365507 128 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 MIR504-201ENST00000385065 83 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 RN7SKP123-201ENST00000410732 291 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 OR9P1P-201ENST00000496431 281 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 RNU7-99P-201ENST00000516271 62 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 MIR3605-201ENST00000583214 100 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 MIR4635-201ENST00000583759 79 ntBASIC3.04□□□□□ -1.92
SNCAIPQ9Y6H5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 RNU1-109P-201ENST00000383960 147 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 MIR562-201ENST00000384894 95 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 MIR27B-201ENST00000385129 97 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 SNORA26-201ENST00000391286 122 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 RNU4-53P-201ENST00000410828 140 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 EDDM3CP-201ENST00000415977 425 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 RNU7-107P-201ENST00000459121 61 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 RNU6-659P-201ENST00000516454 104 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 RNU6-1291P-201ENST00000516591 104 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 Y_RNA.757-201ENST00000578934 114 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 MIR4769-201ENST00000584126 77 ntBASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNCAIPQ9Y6H5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
SNCAIPQ9Y6H5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
SNCAIPQ9Y6H5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
SNCAIPQ9Y6H5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SNCAIPQ9Y6H5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms