Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC022080.3-201ENST00000544433 482 ntBASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR6798-201ENST00000612887 67 ntBASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GTF3C3Q9Y5Q9 AL596028.1-201ENST00000326971 197 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 Y_RNA.435-201ENST00000384095 112 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR802-201ENST00000390235 94 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU2-55P-201ENST00000411146 174 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 AL356379.1-201ENST00000414105 126 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 AL513328.1-201ENST00000446460 224 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 SNORD11-201ENST00000459124 84 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 CYCTP-201ENST00000504253 315 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR4662B-201ENST00000579498 81 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR4744-201ENST00000581563 82 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 AC072026.1-201ENST00000605023 201 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 AC021506.2-201ENST00000612354 169 ntBASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
GTF3C3Q9Y5Q9 AC096644.4-201ENST00000563417 2912 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU6-163P-201ENST00000384396 106 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 MTND5P15-201ENST00000434246 349 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 JTBP1-201ENST00000441314 247 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 AC104435.1-201ENST00000483483 166 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 RNA5SP356-201ENST00000515972 94 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 CBX3P4-201ENST00000538909 354 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 AL021707.8-201ENST00000609428 183 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR8074-201ENST00000615081 81 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 AC034229.5-201ENST00000624258 185 ntBASIC3.31□□□□□ -1.88
GTF3C3Q9Y5Q9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU6-1123P-201ENST00000362347 106 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 snoU2_19.4-201ENST00000364329 80 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU1-112P-201ENST00000364401 164 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 Y_RNA.572-201ENST00000384757 98 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 AL139132.1-201ENST00000431587 344 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 SNORA84-201ENST00000459229 133 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 RNA5SP168-201ENST00000516642 112 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 AP002392.1-201ENST00000537692 208 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR3158-1-201ENST00000583596 81 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 AL049861.1-201ENST00000603130 150 ntBASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU6-424P-201ENST00000384367 105 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR1267-201ENST00000408723 78 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 HMGN2P32-201ENST00000444648 269 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 AC245047.8-201ENST00000456455 284 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 Y_RNA.797-201ENST00000515977 94 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU7-12P-201ENST00000516030 62 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 SNORA67.7-201ENST00000516664 135 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 AC120024.3-201ENST00000603167 156 ntBASIC3.29□□□□□ -1.88
GTF3C3Q9Y5Q9 ZNF658B-202ENST00000615961 3375 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 SNORA12.1-201ENST00000390873 148 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 RNU6-918P-201ENST00000391219 106 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 SNORA26-201ENST00000391286 122 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 AL606845.1-201ENST00000404881 255 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 RNA5SP338-201ENST00000410495 85 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 MIR4308-201ENST00000580634 81 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.28□□□□□ -1.88
GTF3C3Q9Y5Q9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR424-201ENST00000362227 98 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORD14E-201ENST00000364009 85 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 Y_RNA.336-201ENST00000365307 109 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-728P-201ENST00000365375 104 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU2-2P-201ENST00000410396 191 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORD45.4-201ENST00000516629 73 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU2-4P-201ENST00000606190 192 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.27□□□□□ -1.89
GTF3C3Q9Y5Q9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-833P-201ENST00000363486 107 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 U8.16-201ENST00000391279 133 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 MIR891A-201ENST00000401237 79 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 RN7SKP192-201ENST00000411291 327 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 HMGN2P38-201ENST00000423806 265 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 AL096840.1-201ENST00000603287 93 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORD3E-202ENST00000627253 216 ntBASIC3.26□□□□□ -1.89
GTF3C3Q9Y5Q9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-1138P-201ENST00000365359 106 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 RNU6-442P-201ENST00000383968 104 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 SNORA79-201ENST00000408376 140 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 RNA5SP120-201ENST00000410900 112 ntBASIC3.25□□□□□ -1.89
GTF3C3Q9Y5Q9 AC004965.1-201ENST00000413033 213 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 406.1 ms