Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SNORD38C-201ENST00000384381 69 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 RNY1P7-201ENST00000384743 110 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 AC107297.1-201ENST00000459991 176 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 RNU7-6P-201ENST00000516845 62 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 AC062037.1-201ENST00000605302 128 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 SNORA50A-202ENST00000629536 136 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 CEP170P1-201ENST00000502249 4587 ntBASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 Y_RNA.10-201ENST00000362371 110 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 RNU6-1134P-201ENST00000365156 101 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 MIR491-201ENST00000384877 84 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 MT-TI-201ENST00000387365 69 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 RNU6-816P-201ENST00000390914 107 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 RNU6-1268P-201ENST00000391214 107 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 RNU6-1239P-201ENST00000391310 107 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 AC009238.1-201ENST00000442165 424 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 AC009237.6-201ENST00000446969 424 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 RN7SKP12-201ENST00000516275 143 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 AC073346.2-201ENST00000624724 2058 ntBASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.3□□□□□ -1.88
HRH3Q9Y5N1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 RNA5SP72-201ENST00000364442 117 ntBASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 RNU6-283P-201ENST00000364788 107 ntBASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 Y_RNA.507-201ENST00000384500 99 ntBASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 AL035398.1-201ENST00000430869 322 ntBASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 AC092185.1-201ENST00000491371 97 ntBASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 AC091932.4-201ENST00000623386 200 ntBASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.29□□□□□ -1.88
HRH3Q9Y5N1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 MFSD8-233ENST00000641482 4860 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 MIR342-201ENST00000362212 99 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 SNORA33-201ENST00000363664 130 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 PGBD4P5-201ENST00000445958 426 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 AL109933.2-201ENST00000452651 260 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 SCARNA23-201ENST00000516060 130 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 RN7SKP83-201ENST00000516512 178 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 SNORA70.24-201ENST00000517233 118 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 U4.6-201ENST00000621618 127 ntBASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HRH3Q9Y5N1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 RNA5SP42-201ENST00000364278 115 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 SNORA25B-201ENST00000365507 128 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 RNU6-1104P-201ENST00000384723 104 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 SNX2P2-201ENST00000424553 323 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 AC245047.3-201ENST00000429428 127 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 SNRPGP14-201ENST00000435400 219 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 BX510359.1-201ENST00000456973 237 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 TRBV12-1-201ENST00000479785 344 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 SNORA74D-201ENST00000516404 141 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 AC022523.2-201ENST00000561045 150 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 AC078899.2-201ENST00000595282 212 ntBASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
HRH3Q9Y5N1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 AL021368.2-201ENST00000606125 5352 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 RNU6-862P-201ENST00000362804 105 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 RNY3P2-201ENST00000362918 102 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 RNU6-525P-201ENST00000363685 104 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 SNORD114-6-201ENST00000364393 72 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 RNU6-1072P-201ENST00000384703 107 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 RNU6-443P-201ENST00000384780 107 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 SNORA11.4-201ENST00000408823 129 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 SNORD105B-201ENST00000458770 79 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 AC026421.1-201ENST00000519101 163 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 MIR4738-201ENST00000579134 87 ntBASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.26□□□□□ -1.89
HRH3Q9Y5N1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms