Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC005840.1-201ENST00000498412 377 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 SNORA31.10-201ENST00000516482 106 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1227P-201ENST00000383981 107 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-855P-201ENST00000410395 104 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AC004965.1-201ENST00000413033 213 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AL162725.1-201ENST00000435405 301 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 POLR2KP2-201ENST00000438155 177 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 PGBD4P5-201ENST00000445958 426 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AL049830.1-201ENST00000468034 425 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AC005908.1-201ENST00000468701 347 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 SNORA31.24-201ENST00000517232 57 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AL358944.1-201ENST00000528537 144 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AC091178.2-201ENST00000584401 117 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 PART1_1.1-201ENST00000611761 217 ntBASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.216-201ENST00000364205 93 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 MIR320A-201ENST00000385302 82 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 RNA5SP482-201ENST00000391269 118 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 AC023790.1-201ENST00000482174 347 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 AC021506.2-201ENST00000612354 169 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 AC073349.3-201ENST00000617616 186 ntBASIC1.67□□□□□ -2.14
KDM3AQ9Y4C1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 MIR337-201ENST00000362281 93 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.527-201ENST00000384573 102 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-130P-201ENST00000411112 103 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC079140.2-201ENST00000506193 142 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 TRMT112P2-201ENST00000512910 132 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-897P-201ENST00000517135 105 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC015720.1-201ENST00000565251 277 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AL355297.3-201ENST00000604082 446 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC005972.2-201ENST00000604690 348 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 SNORA1B-201ENST00000362535 133 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 SNORA33.2-201ENST00000365413 134 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RNA5SP259-201ENST00000365541 109 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.422-201ENST00000384054 114 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RPL30P13-201ENST00000418873 348 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC009474.2-201ENST00000451383 136 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 U8.19-201ENST00000459095 133 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AL161670.1-201ENST00000554348 137 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AL442663.2-201ENST00000554385 511 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 DEFB117-201ENST00000602356 141 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 RAC1P9-201ENST00000604990 392 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AL513423.1-201ENST00000621695 132 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 AC095038.3-201ENST00000634439 195 ntBASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.66□□□□□ -2.14
KDM3AQ9Y4C1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 SNORD113-8-201ENST00000363497 74 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-338P-201ENST00000383888 105 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.508-201ENST00000384502 114 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 MIR499A-201ENST00000384903 122 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.602-201ENST00000410535 92 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 AL161935.2-201ENST00000414627 60 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-966P-201ENST00000516479 104 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 RNU6-1153P-201ENST00000516760 105 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 AC131281.1-201ENST00000522984 164 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 MIR3937-201ENST00000580135 106 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 MIR4680-201ENST00000580906 66 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 MIR4300-201ENST00000581016 96 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 SNORD3E-202ENST00000627253 216 ntBASIC1.65□□□□□ -2.15
KDM3AQ9Y4C1 ZNF209P-201ENST00000593450 2304 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 RNU4-90P-201ENST00000362773 141 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 SNORA63-201ENST00000363450 132 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 SNORD116-13-201ENST00000384408 92 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 MIR194-1-201ENST00000384892 85 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 MTCYBP6-201ENST00000441810 138 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 RPS20P10-201ENST00000451209 253 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 AC099513.1-201ENST00000490423 301 ntBASIC1.64□□□□□ -2.15
KDM3AQ9Y4C1 RNY3P15-201ENST00000516297 97 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms