Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
R3HCC1Q9Y3T6 AC244015.1-201ENST00000622301 99 ntBASIC2.75□□□□□ -1.97
R3HCC1Q9Y3T6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 Y_RNA.229-201ENST00000364347 113 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 Y_RNA.555-201ENST00000384673 110 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 MT-TT-201ENST00000387460 66 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 RNA5SP450-201ENST00000411206 102 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 RPS27P1-201ENST00000450552 247 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 AC108938.1-201ENST00000451204 136 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 AC245047.8-201ENST00000456455 284 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 AC074198.2-201ENST00000508153 258 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 RNU6-341P-201ENST00000516973 96 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 AC069114.2-201ENST00000604699 304 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 MIR6852-201ENST00000621699 66 ntBASIC2.74□□□□□ -1.97
R3HCC1Q9Y3T6 Y_RNA.203-201ENST00000364106 102 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 Y_RNA.270-201ENST00000364693 104 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 RNU6-886P-201ENST00000384319 105 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 RNA5SP109-201ENST00000391010 116 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 MIR5688-201ENST00000580619 83 ntBASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
R3HCC1Q9Y3T6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 RNU4-70P-201ENST00000384579 139 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 SNORA48.1-201ENST00000390879 135 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 RN7SKP164-201ENST00000516138 266 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 RNU1-104P-201ENST00000517280 175 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 MIR6895-201ENST00000613497 78 ntBASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
R3HCC1Q9Y3T6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 MIRLET7G-201ENST00000362280 84 ntBASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 SNORA1B-201ENST00000362535 133 ntBASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 RNU4-41P-201ENST00000364426 143 ntBASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 RNU11-5P-201ENST00000391216 129 ntBASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 AP000553.5-201ENST00000641933 54 ntBASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
R3HCC1Q9Y3T6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.182-201ENST00000363880 111 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.412-201ENST00000384001 104 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 MIR616-201ENST00000385293 97 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 RNU7-94P-201ENST00000459576 63 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 RNA5SP24-201ENST00000516478 95 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 RNU6-1007P-201ENST00000516586 107 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 SUB1P4-201ENST00000566062 339 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 U6.106-201ENST00000636360 105 ntBASIC2.7□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.121-201ENST00000363309 113 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 RNU6-1209P-201ENST00000363655 107 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.240-201ENST00000364469 95 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 UBE2DNL-203ENST00000474922 222 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 AC079804.2-201ENST00000490376 200 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 RPL23AP91-201ENST00000569211 455 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 MIR4529-201ENST00000578110 78 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 AL021707.8-201ENST00000609428 183 ntBASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
R3HCC1Q9Y3T6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.180-201ENST00000363867 113 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 SNORD114-30-201ENST00000364448 72 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 SNORD23.1-201ENST00000408212 104 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 RN7SKP101-201ENST00000411376 320 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 AC245047.3-201ENST00000429428 127 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 SNORA59A-201ENST00000459326 152 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 RNU2-19P-201ENST00000517288 84 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 MIR4744-201ENST00000581563 82 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 AC108706.1-201ENST00000611053 297 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.68□□□□□ -1.98
R3HCC1Q9Y3T6 RNU6-103P-201ENST00000363686 107 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.253-201ENST00000364562 112 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 RNU6-578P-201ENST00000390980 103 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AL606845.1-201ENST00000404881 255 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AC055731.1-201ENST00000474387 401 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AC104435.1-201ENST00000483483 166 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.797-201ENST00000515977 94 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 Y_RNA.662-201ENST00000516028 97 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 MRPS18CP4-201ENST00000535821 231 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AL391903.3-201ENST00000612158 163 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AC012640.5-201ENST00000623897 319 ntBASIC2.67□□□□□ -1.98
R3HCC1Q9Y3T6 AP006437.1-201ENST00000641440 3685 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 SNORA63D-201ENST00000364359 132 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 SNORA67.1-201ENST00000364749 141 ntBASIC2.66□□□□□ -1.98
R3HCC1Q9Y3T6 MTND2P29-201ENST00000438595 412 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms