Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 MIR4319-201ENST00000577285 85 ntBASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 MIR4679-2-201ENST00000578358 77 ntBASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 AL365205.2-201ENST00000594586 68 ntBASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 MIR5739-201ENST00000619803 80 ntBASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 AC096644.4-201ENST00000563417 2912 ntBASIC3.54□□□□□ -1.84
CHMP3Q9Y3E7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 SNORA26-201ENST00000391286 122 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AC104332.2-201ENST00000429959 156 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AC233266.1-201ENST00000454518 96 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 CKS1BP2-201ENST00000497342 240 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AC096725.1-201ENST00000514266 313 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 RNU6-1291P-201ENST00000516591 104 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 RNU6-365P-201ENST00000517113 106 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AC006023.1-201ENST00000603944 259 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AC242852.1-201ENST00000612151 96 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AL121890.5-201ENST00000620848 304 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AC244015.1-201ENST00000622301 99 ntBASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.53□□□□□ -1.84
CHMP3Q9Y3E7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 MIR95-201ENST00000385072 81 ntBASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 MIRLET7F2-201ENST00000385277 83 ntBASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 RN7SKP19-201ENST00000516016 252 ntBASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 RNA5SP380-201ENST00000517190 98 ntBASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 AL035425.3-201ENST00000564206 4996 ntBASIC3.52□□□□□ -1.85
CHMP3Q9Y3E7 RNU1-96P-201ENST00000364163 162 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 SNORA68.1-201ENST00000364537 132 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 Y_RNA.253-201ENST00000364562 112 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 SNORD72-201ENST00000390994 80 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 RNA5SP467-201ENST00000391274 118 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 RNA5SP89-201ENST00000410300 108 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 RNU6-1270P-201ENST00000517128 108 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 MIR4662B-201ENST00000579498 81 ntBASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.51□□□□□ -1.85
CHMP3Q9Y3E7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 AC108206.1-201ENST00000570186 4159 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 RNU6-1255P-201ENST00000363434 112 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 MIR512-1-201ENST00000384913 84 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 MIR520G-201ENST00000385064 90 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 SNRPGP10-201ENST00000432323 225 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 AC023141.11-201ENST00000508864 202 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 RN7SKP43-201ENST00000516173 320 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 MIR4506-201ENST00000584693 77 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 AC025166.1-201ENST00000612411 163 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 MIR4679-1-201ENST00000637619 75 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 AC008555.8-201ENST00000623602 2168 ntBASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.5□□□□□ -1.85
CHMP3Q9Y3E7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 SNORA33-201ENST00000363664 130 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 SNORD61-201ENST00000384252 73 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 Z96811.1-201ENST00000445880 108 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 Y_RNA.649-201ENST00000459077 103 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 HMGN1P7-201ENST00000491722 313 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 AC011406.1-201ENST00000512440 370 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 RNU6-1041P-201ENST00000516254 102 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 SNORA48.11-201ENST00000517015 89 ntBASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.49□□□□□ -1.85
CHMP3Q9Y3E7 RNU1-112P-201ENST00000364401 164 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 SNORD21-201ENST00000383953 95 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 MIR592-201ENST00000384959 97 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 AL138827.1-201ENST00000402666 306 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 AC018634.1-201ENST00000437554 401 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 AC108938.1-201ENST00000451204 136 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 SNORD109B-201ENST00000458961 67 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 SNORD109A-201ENST00000459128 67 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 AP004217.1-201ENST00000480579 346 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 SEM1P1-201ENST00000506694 209 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 RPL23AP94-201ENST00000512518 302 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 RNA5SP236-201ENST00000516169 116 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 Y_RNA.666-201ENST00000516187 112 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 RNU6-168P-201ENST00000516189 101 ntBASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHMP3Q9Y3E7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 MTND5P18-201ENST00000445624 1801 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 Y_RNA.267-201ENST00000364679 109 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 AL031121.1-201ENST00000406553 254 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 AF228730.3-201ENST00000436691 102 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 AL021397.1-201ENST00000451806 248 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 RNU6-504P-201ENST00000516568 104 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 ZNF861P-201ENST00000588126 639 ntBASIC3.47□□□□□ -1.85
CHMP3Q9Y3E7 AC007229.1-201ENST00000590455 412 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms