Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC004832.4-201ENST00000608952 331 ntBASIC1.02□□□□□ -2.25
FOXA2Q9Y261 AL157834.3-201ENST00000615543 103 ntBASIC1.02□□□□□ -2.25
FOXA2Q9Y261 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
FOXA2Q9Y261 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
FOXA2Q9Y261 RNU6-1084P-201ENST00000362498 107 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.146-201ENST00000363549 102 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 RNU6-1175P-201ENST00000365200 107 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 SNORD12-201ENST00000391002 90 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AC063976.4-201ENST00000421971 163 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AC236972.2-201ENST00000434979 310 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AC005042.3-201ENST00000453230 174 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 RPS29P29-201ENST00000456396 171 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AC004223.1-201ENST00000479840 271 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 RN7SKP179-201ENST00000516126 217 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.01□□□□□ -2.25
FOXA2Q9Y261 MIR3660-201ENST00000584845 100 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 RPS29P30-201ENST00000600975 111 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AC022441.3-201ENST00000605737 136 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AL138825.1-201ENST00000618587 192 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 AL353770.2-201ENST00000620024 78 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 MIR4272-201ENST00000635924 64 ntBASIC1.01□□□□□ -2.25
FOXA2Q9Y261 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
FOXA2Q9Y261 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.172-201ENST00000363765 102 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 U8.5-201ENST00000364528 136 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.253-201ENST00000364562 112 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.329-201ENST00000365209 107 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.336-201ENST00000365307 109 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.356-201ENST00000365475 113 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 SNORA80D-201ENST00000384488 135 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 RNU6-1009P-201ENST00000390996 107 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 RNU6-855P-201ENST00000410395 104 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 MCFD2P1-201ENST00000417812 300 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1□□□□□ -2.25
FOXA2Q9Y261 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1□□□□□ -2.25
FOXA2Q9Y261 RPS20P10-201ENST00000451209 253 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 U8.19-201ENST00000459095 133 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 SNORD79.1-201ENST00000516069 84 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 AC090821.2-201ENST00000523552 176 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 RBM11P1-201ENST00000604951 799 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.772-201ENST00000606692 102 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 snoU13.31-201ENST00000607291 104 ntBASIC1□□□□□ -2.25
FOXA2Q9Y261 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1□□□□□ -2.25
FOXA2Q9Y261 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1□□□□□ -2.25
FOXA2Q9Y261 AL391987.6-201ENST00000305671 199 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.39-201ENST00000362620 98 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 RPL23AP36-201ENST00000413895 458 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 AL390729.2-201ENST00000416137 156 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.99□□□□□ -2.25
FOXA2Q9Y261 RNU7-152P-201ENST00000458982 64 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 SNORD19B-201ENST00000459623 84 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 RNU6-875P-201ENST00000516488 106 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.714-201ENST00000517065 90 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.99□□□□□ -2.25
FOXA2Q9Y261 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.99□□□□□ -2.25
FOXA2Q9Y261 MIR4762-201ENST00000585261 75 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 AC092447.9-201ENST00000603395 144 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
FOXA2Q9Y261 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 AL008636.1-201ENST00000625038 1018 ntBASIC0.99□□□□□ -2.25
FOXA2Q9Y261 RNA5SP432-201ENST00000362480 116 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 RNU6-1115P-201ENST00000362490 106 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 SNORA72-201ENST00000384339 132 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.570-201ENST00000384750 101 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 MIR19B1-201ENST00000384829 87 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 RNU6-131P-201ENST00000391144 107 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 MIR1298-201ENST00000408783 112 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXA2Q9Y261 AC024067.1-201ENST00000426199 223 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXA2Q9Y261 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.98□□□□□ -2.25
FOXA2Q9Y261 AC092473.1-201ENST00000441098 221 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 FGF7P4-201ENST00000509595 295 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 RNU6-966P-201ENST00000516479 104 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 AL096861.1-201ENST00000610899 123 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 AC012676.2-201ENST00000619258 186 ntBASIC0.98□□□□□ -2.25
FOXA2Q9Y261 snoU2-30.1-201ENST00000365012 70 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.331-201ENST00000365267 102 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.341-201ENST00000365341 102 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.363-201ENST00000365529 113 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.529-201ENST00000384586 119 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 MIR516B2-201ENST00000385190 85 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 MIR136-201ENST00000385207 82 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 AL591704.2-201ENST00000421658 181 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.97□□□□□ -2.25
FOXA2Q9Y261 HMGN1P7-201ENST00000491722 313 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 SNORA25.10-201ENST00000515926 124 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
FOXA2Q9Y261 Y_RNA.303-201ENST00000364998 94 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 MIR522-201ENST00000385071 87 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AL160004.2-201ENST00000432935 350 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AL603825.1-201ENST00000438481 80 ntBASIC0.96□□□□□ -2.26
FOXA2Q9Y261 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms