Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
AP4E1Q9UPM8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 MIR1263-201ENST00000408324 86 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 RPS15AP28-201ENST00000435088 386 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 CYP2C59P-201ENST00000457790 269 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 RPS29P12-201ENST00000460178 152 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 SCGB1D5P-201ENST00000515134 247 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 Y_RNA.666-201ENST00000516187 112 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 RNA5SP341-201ENST00000516261 117 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 RNU6-1146P-201ENST00000516282 102 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 RNU6-113P-201ENST00000516653 101 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 RNU6-1149P-201ENST00000516810 97 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 SNORA70.24-201ENST00000517233 118 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 MIR5582-201ENST00000579697 68 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 MIR376A2-201ENST00000636782 80 ntBASIC3.05□□□□□ -1.92
AP4E1Q9UPM8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 Y_RNA.528-201ENST00000384575 108 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 MIR518F-201ENST00000384973 87 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 SNORD77.3-201ENST00000391113 65 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 RNU6-554P-201ENST00000410466 106 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 AL353689.1-201ENST00000438895 199 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 AP004217.1-201ENST00000480579 346 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 AL161756.2-201ENST00000604597 246 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 AL353149.1-201ENST00000610667 244 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 MIR6079-201ENST00000635807 62 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 AC018630.2-201ENST00000534866 2403 ntBASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.04□□□□□ -1.92
AP4E1Q9UPM8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 MIR570-201ENST00000384917 97 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 MIR592-201ENST00000384959 97 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 RNA5SP467-201ENST00000391274 118 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 MIR1289-1-201ENST00000408836 144 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 AC022018.1-201ENST00000430685 241 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 AC233266.1-201ENST00000454518 96 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 RPS29P24-201ENST00000486345 171 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 RNU6-341P-201ENST00000516973 96 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 AL358944.1-201ENST00000528537 144 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 AC242852.1-201ENST00000612151 96 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 AL162274.2-201ENST00000614406 332 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 AC244015.1-201ENST00000622301 99 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 MIR338-201ENST00000636369 67 ntBASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
AP4E1Q9UPM8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 MIR491-201ENST00000384877 84 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 SNRPGP13-201ENST00000442212 177 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AC018868.1-201ENST00000491307 315 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AC023141.11-201ENST00000508864 202 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 RNU6-412P-201ENST00000516434 106 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 MIR4325-201ENST00000583049 90 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AC087685.1-201ENST00000587507 141 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AL359075.3-201ENST00000613288 217 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 AL591926.4-201ENST00000616895 298 ntBASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.02□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.85-201ENST00000363014 111 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 SNORA33-201ENST00000363664 130 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 RNU6-1107P-201ENST00000364817 104 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.366-201ENST00000365540 102 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 RNU11-5P-201ENST00000391216 129 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 RNA5SP136-201ENST00000410906 107 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 CKS1BP2-201ENST00000497342 240 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 RNU6-693P-201ENST00000516134 107 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.677-201ENST00000516401 85 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 RN7SKP282-201ENST00000516824 299 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 AC007012.1-201ENST00000567192 175 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 MIR5197-201ENST00000583721 112 ntBASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
AP4E1Q9UPM8 ZNF271P-202ENST00000465539 1970 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.267-201ENST00000364679 109 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 RNA5SP125-201ENST00000364843 120 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 COX6CP6-201ENST00000490840 228 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3□□□□□ -1.93
AP4E1Q9UPM8 RNU6-1041P-201ENST00000516254 102 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3□□□□□ -1.93
AP4E1Q9UPM8 AL137067.1-201ENST00000615933 120 ntBASIC3□□□□□ -1.93
AP4E1Q9UPM8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
AP4E1Q9UPM8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 MIR126-201ENST00000362291 85 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.369-201ENST00000365568 117 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 Y_RNA.549-201ENST00000384657 102 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 MIR522-201ENST00000385071 87 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 SNORD12C-201ENST00000386307 89 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 AL117342.1-201ENST00000404861 406 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 AC007064.1-201ENST00000412238 351 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 EDDM3CP-201ENST00000415977 425 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 RNU6-667P-201ENST00000517186 102 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 SNORA31.26-201ENST00000517250 137 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 RNU6-537P-201ENST00000517277 103 ntBASIC2.99□□□□□ -1.93
AP4E1Q9UPM8 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms