Protein–RNA interactions for Protein: Q9UKI3

VPREB3, Pre-B lymphocyte protein 3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3Q9UKI3 SNORA74.3-201ENST00000517108 154 ntBASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 AC036111.3-201ENST00000526389 112 ntBASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 AC011195.1-201ENST00000578177 177 ntBASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 AF250324.2-201ENST00000608299 610 ntBASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 AC008133.2-201ENST00000624540 351 ntBASIC0.33□□□□□ -2.36
VPREB3Q9UKI3 RNY1P16-201ENST00000363063 111 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 RNU6-654P-201ENST00000364373 107 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 U8.5-201ENST00000364528 136 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 SNORD116-1-201ENST00000384335 95 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 AL390729.2-201ENST00000416137 156 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 MTND1P1-201ENST00000445453 368 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 SNORA40.9-201ENST00000515895 93 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 SNORA18.7-201ENST00000516910 131 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 MIR4764-201ENST00000580680 88 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 AC025627.3-201ENST00000582078 182 ntBASIC0.32□□□□□ -2.36
VPREB3Q9UKI3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 AC068700.1-201ENST00000565862 3754 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 Y_RNA.243-201ENST00000364481 109 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 SNORD14.1-201ENST00000365609 90 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 RNU6-318P-201ENST00000384283 103 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 RNU1-119P-201ENST00000391122 165 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 RNU6-994P-201ENST00000410507 111 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 RNA5SP222-201ENST00000411039 105 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 AC005534.2-201ENST00000431047 433 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 AL353997.1-201ENST00000432936 108 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 SNORD5.1-201ENST00000458800 75 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 AC026407.1-201ENST00000518369 204 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 MIR3662-201ENST00000637030 95 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 AC100810.6-201ENST00000638068 285 ntBASIC0.31□□□□□ -2.36
VPREB3Q9UKI3 RNA5SP48-201ENST00000363969 126 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 SNORA36.2-201ENST00000384004 127 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 MIR136-201ENST00000385207 82 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 RNA5SP95-201ENST00000410319 137 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 RNA5SP475-201ENST00000410568 110 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 AC067940.1-201ENST00000458411 300 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 RNU6-314P-201ENST00000516574 104 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 RNU6-566P-201ENST00000516790 107 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 AC105029.1-201ENST00000520250 669 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 AF235103.2-201ENST00000525753 346 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 AC109635.3-201ENST00000529536 185 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 MIR4762-201ENST00000585261 75 ntBASIC0.3□□□□□ -2.36
VPREB3Q9UKI3 SNORD115-30-201ENST00000364117 82 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 AC117470.1-201ENST00000381974 330 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 MIR1302-7-201ENST00000408841 72 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 SNORD123-201ENST00000459473 70 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 AC026782.1-201ENST00000512952 449 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 SNORA25.10-201ENST00000515926 124 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 RNU6-506P-201ENST00000516553 94 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 MIR4790-201ENST00000577799 79 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 MIR924-201ENST00000638017 53 ntBASIC0.29□□□□□ -2.36
VPREB3Q9UKI3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 MIR522-201ENST00000385071 87 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 RNU6-700P-201ENST00000391043 107 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 SNORD111-201ENST00000408139 94 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 RNU6-373P-201ENST00000411247 98 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 MLLT10P1-201ENST00000418346 262 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 MTND1P29-201ENST00000448112 647 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 SUMO1P2-201ENST00000452524 304 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 RNU4-57P-201ENST00000515980 135 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 RN7SKP12-201ENST00000516275 143 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 RNU7-43P-201ENST00000516554 64 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 AC055872.1-201ENST00000570978 278 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 AC018462.2-201ENST00000605375 395 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 AC103591.3-201ENST00000608684 209 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
VPREB3Q9UKI3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
VPREB3Q9UKI3 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
VPREB3Q9UKI3 SNORD114-7-201ENST00000362520 77 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 RNU4-75P-201ENST00000364621 146 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 Y_RNA.301-201ENST00000364990 103 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 MIR1827-201ENST00000408549 66 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
VPREB3Q9UKI3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms