Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.95□□□□□ -2.26
RIMS3Q9UJD0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.39-201ENST00000362620 98 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 SNORD68-201ENST00000363214 84 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 RNA5SP99-201ENST00000364020 114 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 RNU6-1175P-201ENST00000365200 107 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 RNU6-163P-201ENST00000384396 106 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 SNORD116-13-201ENST00000384408 92 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 RNU6-1054P-201ENST00000411293 104 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 AL390729.2-201ENST00000416137 156 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 RPL39P39-201ENST00000455840 151 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 SNORA31.2-201ENST00000516019 134 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 SNORA70.22-201ENST00000517160 124 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 AP000942.3-201ENST00000603702 160 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 BX284668.6-201ENST00000606899 438 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 AC010205.1-201ENST00000616668 449 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 AC091925.1-201ENST00000623204 462 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
RIMS3Q9UJD0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 U8.5-201ENST00000364528 136 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.252-201ENST00000364556 101 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RNU1-115P-201ENST00000365329 160 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.570-201ENST00000384750 101 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RNU6-710P-201ENST00000410424 105 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 MCFD2P1-201ENST00000417812 300 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AC104332.1-201ENST00000440471 797 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AC005042.3-201ENST00000453230 174 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 U8.19-201ENST00000459095 133 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.661-201ENST00000516003 99 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RNU6-976P-201ENST00000516086 111 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RNU6-947P-201ENST00000516264 106 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RNU6-1116P-201ENST00000517269 99 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 RPS29P30-201ENST00000600975 111 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AC092447.9-201ENST00000603395 144 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AC005972.2-201ENST00000604690 348 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.772-201ENST00000606692 102 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AC004832.4-201ENST00000608952 331 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AL591926.4-201ENST00000616895 298 ntBASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
RIMS3Q9UJD0 AL391987.6-201ENST00000305671 199 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.462-201ENST00000384268 102 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.496-201ENST00000384444 101 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 RPL23AP36-201ENST00000413895 458 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 AC245047.7-201ENST00000440265 293 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 RNU6-507P-201ENST00000516045 100 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 SNORD116-28-201ENST00000516123 91 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 RNU6-966P-201ENST00000516479 104 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 SNORA40.14-201ENST00000516543 86 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 AC093027.1-201ENST00000546698 429 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 MIR4423-201ENST00000580922 80 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 MIR4762-201ENST00000585261 75 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.92□□□□□ -2.26
RIMS3Q9UJD0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 RNU4-79P-201ENST00000362764 141 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.172-201ENST00000363765 102 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.329-201ENST00000365209 107 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 Y_RNA.526-201ENST00000384572 110 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 MIR452-201ENST00000385020 85 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 RNU6-910P-201ENST00000390844 107 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AF228730.4-201ENST00000421457 183 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 PIGPP3-201ENST00000425307 415 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AL160004.2-201ENST00000432935 350 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 RPS20P10-201ENST00000451209 253 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 LINC01399-202ENST00000458450 244 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 OR2A41P-201ENST00000473586 105 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AC048334.1-201ENST00000477975 159 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AC114811.1-201ENST00000507207 168 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 RNU4-77P-201ENST00000516692 156 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 MIR5188-201ENST00000583467 113 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 FAM106DP-201ENST00000586416 501 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AL121655.1-201ENST00000605811 308 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AC104985.2-201ENST00000620598 500 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AL606534.2-204ENST00000635008 178 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 AC112487.2-201ENST00000637950 304 ntBASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
RIMS3Q9UJD0 RNU1-124P-201ENST00000363861 145 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 SNORA72-201ENST00000384339 132 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 MIR526A1-201ENST00000384897 85 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 AC024067.1-201ENST00000426199 223 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 MTND3P22-201ENST00000510932 243 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 Y_RNA.713-201ENST00000517013 96 ntBASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.9□□□□□ -2.27
RIMS3Q9UJD0 Y_RNA.5-201ENST00000362334 102 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms