Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC005357.1-201ENST00000588399 301 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 AL162424.1-201ENST00000602325 221 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.85□□□□□ -2.11
SIX4Q9UIU6 AC004832.4-201ENST00000608952 331 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 AC090425.1-201ENST00000610007 140 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.85□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.65-201ENST00000362846 100 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.269-201ENST00000364685 89 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 RNU6-763P-201ENST00000390865 106 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 RNU6-1248P-201ENST00000391096 64 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SIX4Q9UIU6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.84□□□□□ -2.11
SIX4Q9UIU6 BTF3P11-201ENST00000426582 477 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 RNU7-172P-201ENST00000517125 64 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
SIX4Q9UIU6 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 BX284668.6-201ENST00000606899 438 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 AL008718.3-201ENST00000610217 321 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 U6.108-201ENST00000637764 58 ntBASIC1.84□□□□□ -2.11
SIX4Q9UIU6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SIX4Q9UIU6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SIX4Q9UIU6 AC134026.1-201ENST00000623249 2239 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SIX4Q9UIU6 RNU1-96P-201ENST00000364163 162 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 SNORA72.4-201ENST00000384174 132 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 SNORD58.1-201ENST00000391313 66 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 U8.19-201ENST00000459095 133 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.83□□□□□ -2.12
SIX4Q9UIU6 SNORD116-28-201ENST00000516123 91 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 AC136628.3-201ENST00000521868 290 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.83□□□□□ -2.12
SIX4Q9UIU6 AC015720.1-201ENST00000565251 277 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 AC005786.1-201ENST00000588553 154 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 snoU18.1-201ENST00000629629 71 ntBASIC1.83□□□□□ -2.12
SIX4Q9UIU6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
SIX4Q9UIU6 AC068700.1-201ENST00000565862 3754 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.82-201ENST00000363000 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.92-201ENST00000363043 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.122-201ENST00000363331 96 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.235-201ENST00000364412 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.306-201ENST00000365015 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.312-201ENST00000365089 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.322-201ENST00000365151 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 RNU6-136P-201ENST00000384663 107 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.590-201ENST00000410140 107 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 RNA5SP511-201ENST00000410487 115 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.82□□□□□ -2.12
SIX4Q9UIU6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
SIX4Q9UIU6 CST2P1-201ENST00000425770 87 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 AC104332.1-201ENST00000440471 797 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.82□□□□□ -2.12
SIX4Q9UIU6 SNORD2.1-201ENST00000458762 69 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.650-201ENST00000459002 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 RNVU1-2-201ENST00000516326 135 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.777-201ENST00000516982 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 RNU6-548P-201ENST00000517083 115 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.771-201ENST00000598668 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 AL359075.3-201ENST00000613288 217 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.789-201ENST00000622480 102 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 AC068647.2-201ENST00000637380 353 ntBASIC1.82□□□□□ -2.12
SIX4Q9UIU6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SIX4Q9UIU6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SIX4Q9UIU6 RNU6-1318P-201ENST00000365389 103 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 RNU6-211P-201ENST00000384047 107 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 RNU6-376P-201ENST00000384731 106 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 MTCO2P33-201ENST00000402100 465 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 RNA5SP450-201ENST00000411206 102 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 AC108210.2-201ENST00000503681 201 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 MIR5094-201ENST00000578766 85 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 MIR4524B-201ENST00000581569 115 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 MIR4282-201ENST00000583613 67 ntBASIC1.81□□□□□ -2.12
SIX4Q9UIU6 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 RNA5SP323-201ENST00000391094 133 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 RNA5SP501-201ENST00000410990 112 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 AL162725.1-201ENST00000435405 301 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 HSPE1P21-201ENST00000438283 308 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 RNU7-141P-201ENST00000459304 62 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 AL163195.1-201ENST00000496941 348 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.8□□□□□ -2.12
SIX4Q9UIU6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.8□□□□□ -2.12
SIX4Q9UIU6 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
SIX4Q9UIU6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms