Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC092807.2-201ENST00000609367 243 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 AL357075.2-201ENST00000614906 189 ntBASIC-0.44□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-125P-201ENST00000384505 107 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-747P-201ENST00000390928 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-131P-201ENST00000391144 107 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-241P-201ENST00000391148 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-447P-201ENST00000410293 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-355P-201ENST00000410427 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-791P-201ENST00000410467 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-705P-201ENST00000410601 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-860P-201ENST00000410860 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 RNU6-785P-201ENST00000411324 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 U6.90-201ENST00000614007 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 AC240442.1-201ENST00000616055 283 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 U6.70-201ENST00000620287 104 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 AF246928.1-201ENST00000623768 87 ntBASIC-0.45□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU6-38P-201ENST00000384085 107 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 AC005042.3-201ENST00000453230 174 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU7-62P-201ENST00000458856 62 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 SNORD11.1-201ENST00000459482 85 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU7-175P-201ENST00000515915 61 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNA5SP401-201ENST00000515920 127 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 AC005176.2-201ENST00000596933 147 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 uc_338.4-201ENST00000616635 176 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 MTND1P7-201ENST00000632801 297 ntBASIC-0.46□□□□□ -2.48
VPS29Q9UBQ0 RNU4-21P-201ENST00000362802 126 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 RNU6-553P-201ENST00000364047 96 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 SNORD38C-201ENST00000384381 69 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 RNY3P10-201ENST00000384764 102 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 USP9YP16-201ENST00000430287 407 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 USP9YP23-201ENST00000455085 407 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 ACA59.1-201ENST00000515966 143 ntBASIC-0.47□□□□□ -2.48
VPS29Q9UBQ0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 MIR410-201ENST00000362222 80 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 SNORA72.1-201ENST00000363485 129 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 RNA5SP127-201ENST00000411051 133 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 MTND3P23-201ENST00000431980 347 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 SNORD4A-201ENST00000459174 72 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 AC104692.1-201ENST00000472406 90 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 SNORA25.10-201ENST00000515926 124 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 RNU6-232P-201ENST00000517144 64 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 AL109933.3-201ENST00000619095 188 ntBASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.48□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 RNU4-20P-201ENST00000365601 151 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 RNU6-128P-201ENST00000383976 107 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 MIR125B2-201ENST00000385128 89 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 MIR760-201ENST00000390220 80 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 MIR892B-201ENST00000401279 77 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 RNU7-159P-201ENST00000459284 62 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 HMGN1P10-201ENST00000474557 553 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 RNU4-49P-201ENST00000516080 140 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 RNA5SP480-201ENST00000516840 109 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 AC022616.4-201ENST00000522985 181 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 AC079248.2-201ENST00000623779 326 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 AP000720.1-201ENST00000625091 483 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 AC099654.12-201ENST00000639868 649 ntBASIC-0.49□□□□□ -2.49
VPS29Q9UBQ0 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 SNORD14E-201ENST00000364009 85 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 RNU6-454P-201ENST00000364292 107 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 SNORA2A-201ENST00000383885 135 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 RNU6-187P-201ENST00000384139 106 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 SNRPGP10-201ENST00000432323 225 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 RNU7-125P-201ENST00000458760 62 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 RNU6-448P-201ENST00000517052 107 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 SNORD92-201ENST00000585078 85 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 AC125232.2-201ENST00000592457 143 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 Z94722.1-201ENST00000604328 474 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 MIR4791-201ENST00000607666 84 ntBASIC-0.5□□□□□ -2.49
VPS29Q9UBQ0 MIR7107-201ENST00000611489 80 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms