Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 RNU6-704P-201ENST00000364162 103 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 Y_RNA.215-201ENST00000364204 112 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 Y_RNA.337-201ENST00000365312 102 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 Y_RNA.488-201ENST00000384403 102 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 RNU11-5P-201ENST00000391216 129 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 SNRPGP8-201ENST00000454064 226 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 AC096725.1-201ENST00000514266 313 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 AC091178.2-201ENST00000584401 117 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 MIR6079-201ENST00000635807 62 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 AC018630.2-201ENST00000534866 2403 ntBASIC2.47□□□□□ -2.01
KCMF1Q9P0J7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
KCMF1Q9P0J7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.343-201ENST00000365354 112 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 CST2P1-201ENST00000425770 87 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 AC018634.1-201ENST00000437554 401 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 AC023449.1-201ENST00000454464 154 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 AC132825.6-201ENST00000638861 357 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 ZNF271P-202ENST00000465539 1970 ntBASIC2.46□□□□□ -2.02
KCMF1Q9P0J7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 RNU4-11P-201ENST00000365287 132 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 MIR515-2-201ENST00000384883 83 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 MIR515-1-201ENST00000384884 83 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 SNORA79-201ENST00000408376 140 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 BX510359.4-201ENST00000423750 193 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 AL163195.1-201ENST00000496941 348 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 DNAJC19P2-201ENST00000593340 302 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 AP001485.1-201ENST00000604799 199 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 uc_338.4-201ENST00000616635 176 ntBASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
KCMF1Q9P0J7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 MIR449A-201ENST00000362113 91 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 RNU1-58P-201ENST00000362413 163 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 SNORD50.2-201ENST00000365465 70 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 SNORD37.2-201ENST00000391075 66 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 RNU6-131P-201ENST00000391144 107 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 RNU4-43P-201ENST00000410628 137 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 AC099677.2-201ENST00000436385 175 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 SNORD11-201ENST00000459124 84 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 RNU6-341P-201ENST00000516973 96 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 AC024995.1-201ENST00000523014 93 ntBASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.44□□□□□ -2.02
KCMF1Q9P0J7 ZNF702P-202ENST00000434269 1966 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 RNU6-199P-201ENST00000362954 107 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.432-201ENST00000384087 111 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.497-201ENST00000384447 98 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 RNA5SP272-201ENST00000516095 111 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 RNU6-1299P-201ENST00000516316 100 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 AC022513.1-201ENST00000624512 117 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
KCMF1Q9P0J7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 AL606753.1-201ENST00000427435 87 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 RPS27P1-201ENST00000450552 247 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 RPS26P45-201ENST00000471748 340 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 SNORA25.12-201ENST00000516202 82 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 RNU6-426P-201ENST00000516464 97 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 MIR548X2-201ENST00000579776 100 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.42□□□□□ -2.02
KCMF1Q9P0J7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 RNA5SP68-201ENST00000363885 119 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 RNU6-484P-201ENST00000384016 107 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 RNU6-768P-201ENST00000384683 107 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 Y_RNA.568-201ENST00000384742 113 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 MIR562-201ENST00000384894 95 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 MIR597-201ENST00000384968 97 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 MIR569-201ENST00000385228 96 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 SNORA12.1-201ENST00000390873 148 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 SNORA11.4-201ENST00000408823 129 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 RNU2-55P-201ENST00000411146 174 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 RNU7-94P-201ENST00000459576 63 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 HMGN1P7-201ENST00000491722 313 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 SNORD77.4-201ENST00000516158 81 ntBASIC2.41□□□□□ -2.02
KCMF1Q9P0J7 MIR6817-201ENST00000615588 66 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms