Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 AC092423.1-201ENST00000430165 186 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 AL162725.1-201ENST00000435405 301 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 RNU7-12P-201ENST00000516030 62 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 RNU6-1096P-201ENST00000517089 102 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 AL590095.2-201ENST00000604136 117 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 MIR6513-201ENST00000621188 64 ntBASIC0.85□□□□□ -2.27
HOXC10Q9NYD6 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 Y_RNA.592-201ENST00000410274 109 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 RPS26P48-201ENST00000491713 339 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 SNORA70.12-201ENST00000516084 153 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 RNU6-1291P-201ENST00000516591 104 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 AC023442.1-201ENST00000531247 422 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 RN7SL793P-201ENST00000583259 296 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 AC084782.3-201ENST00000612282 578 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 AC022306.2-201ENST00000617563 647 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 AC139792.2-201ENST00000624218 587 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 AL669831.3-213ENST00000636676 183 ntBASIC0.84□□□□□ -2.27
HOXC10Q9NYD6 RNY3P4-201ENST00000384428 101 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 SNORA80D-201ENST00000384488 135 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 MIR508-201ENST00000384857 115 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 MIR216A-201ENST00000385063 110 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 AC063976.4-201ENST00000421971 163 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 MIR2053-201ENST00000459295 91 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 CYCTP-201ENST00000504253 315 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 AC098679.4-201ENST00000624241 654 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
HOXC10Q9NYD6 RNU6-1188P-201ENST00000363795 107 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR625-201ENST00000385047 85 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 SNORA69.1-201ENST00000390904 137 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR891A-201ENST00000401237 79 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 RNU4-14P-201ENST00000410858 122 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 PDCL2P1-201ENST00000419302 352 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 RPL39P39-201ENST00000455840 151 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.635-201ENST00000459041 101 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR1244-1-201ENST00000612829 85 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AC025253.1-201ENST00000613623 543 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AC004467.1-201ENST00000615678 330 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR6779-201ENST00000617283 64 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR1244-3-201ENST00000635744 85 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR1244-2-201ENST00000636449 85 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR1244-4-202ENST00000636813 85 ntBASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
HOXC10Q9NYD6 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 RNU2-54P-201ENST00000410299 190 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 RNU6-1156P-201ENST00000410365 100 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 RNA5SP511-201ENST00000410487 115 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AL354751.2-201ENST00000415471 210 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 ELOCP24-201ENST00000456370 334 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 LINC01399-202ENST00000458450 244 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 RNU6-408P-201ENST00000515910 100 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 RNU6-911P-201ENST00000516523 104 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 RNU7-4P-201ENST00000516961 62 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC090142.3-201ENST00000519012 385 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC022616.4-201ENST00000522985 181 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC005730.3-201ENST00000583067 366 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AL391903.3-201ENST00000612158 163 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 AC092794.1-201ENST00000612734 582 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 CASC19-280ENST00000642102 1351 ntBASIC0.81□□□□□ -2.28
HOXC10Q9NYD6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 RNU6-961P-201ENST00000363893 105 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.336-201ENST00000365307 109 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 MIR526A1-201ENST00000384897 85 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 MIR936-201ENST00000401264 98 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 Y_RNA.646-201ENST00000410980 101 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 U8.19-201ENST00000459095 133 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 RNU7-21P-201ENST00000459430 62 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 RNU6-1337P-201ENST00000516525 95 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 AC055872.1-201ENST00000570978 278 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 MIR5690-201ENST00000583739 73 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 RBM11P1-201ENST00000604951 799 ntBASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.8□□□□□ -2.28
HOXC10Q9NYD6 AC117470.1-201ENST00000381974 330 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms