Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
BLOC1S4Q9NUP1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.38□□□□□ -2.19
BLOC1S4Q9NUP1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.38□□□□□ -2.19
BLOC1S4Q9NUP1 AL606534.2-204ENST00000635008 178 ntBASIC1.38□□□□□ -2.19
BLOC1S4Q9NUP1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
BLOC1S4Q9NUP1 MIR452-201ENST00000385020 85 ntBASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 MIR4423-201ENST00000580922 80 ntBASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 MIR4762-201ENST00000585261 75 ntBASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
BLOC1S4Q9NUP1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-708P-201ENST00000384217 107 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 SNORD41-201ENST00000386967 70 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AC093850.1-201ENST00000454121 251 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AC093852.1-201ENST00000503587 266 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 RNA5SP458-201ENST00000516188 119 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 SNORA70.22-201ENST00000517160 124 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AP001094.1-201ENST00000579805 193 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AL117336.2-201ENST00000602435 335 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AL022345.2-201ENST00000606307 135 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 BX284668.6-201ENST00000606899 438 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AC004832.4-201ENST00000608952 331 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
BLOC1S4Q9NUP1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 SNORA72-201ENST00000384339 132 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 SNORD116-13-201ENST00000384408 92 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 MIR222-201ENST00000384992 110 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 AC022028.1-201ENST00000412054 408 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 AF228730.4-201ENST00000421457 183 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 LINC01399-202ENST00000458450 244 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-507P-201ENST00000516045 100 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-475P-201ENST00000516073 104 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 RNU7-116P-201ENST00000516940 62 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 AC093027.1-201ENST00000546698 429 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 MIR5188-201ENST00000583467 113 ntBASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
BLOC1S4Q9NUP1 RNU4-50P-201ENST00000364361 141 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 SNORD12-201ENST00000391002 90 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 AC015922.2-201ENST00000435593 184 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 RPEP5-201ENST00000441137 268 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 RPS20P10-201ENST00000451209 253 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 U8.20-201ENST00000459445 131 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 RNU6-237P-201ENST00000515985 71 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 RNU4-77P-201ENST00000516692 156 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 AC011373.1-201ENST00000607270 237 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 AL591926.4-201ENST00000616895 298 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 AC112487.2-201ENST00000637950 304 ntBASIC1.34□□□□□ -2.19
BLOC1S4Q9NUP1 RNA5SP432-201ENST00000362480 116 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.331-201ENST00000365267 102 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.431-201ENST00000384086 102 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 RNY3P14-201ENST00000384309 102 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 MIR15B-201ENST00000385045 98 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-855P-201ENST00000410395 104 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 AL603825.1-201ENST00000438481 80 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 AC245047.7-201ENST00000440265 293 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 AC104332.1-201ENST00000440471 797 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 SNORD116-28-201ENST00000516123 91 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-947P-201ENST00000516264 106 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.804-201ENST00000615262 101 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 AC027335.2-201ENST00000624030 375 ntBASIC1.33□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 RNU4-79P-201ENST00000362764 141 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.456-201ENST00000384232 111 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 SNORD63-201ENST00000384262 68 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 HMGN2P32-201ENST00000444648 269 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 RNU7-110P-201ENST00000516891 62 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 FAM106DP-201ENST00000586416 501 ntBASIC1.32□□□□□ -2.2
BLOC1S4Q9NUP1 RNU4-73P-201ENST00000363164 141 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 HMGN1P7-201ENST00000491722 313 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 AL133373.1-201ENST00000497098 94 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 AC114811.1-201ENST00000507207 168 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
BLOC1S4Q9NUP1 AC007742.2-201ENST00000618226 398 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 400.4 ms