Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNU6-747P-201ENST00000390928 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-241P-201ENST00000391148 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-447P-201ENST00000410293 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-355P-201ENST00000410427 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-791P-201ENST00000410467 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNA5SP475-201ENST00000410568 110 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-705P-201ENST00000410601 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-860P-201ENST00000410860 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-785P-201ENST00000411324 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 MIR18B-201ENST00000454574 71 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-848P-201ENST00000515948 107 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-617P-201ENST00000516147 107 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-473P-201ENST00000516164 107 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 MIR5701-3-201ENST00000578890 82 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 MIR5701-1-201ENST00000585138 82 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 AC019193.3-201ENST00000609144 554 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 U6.90-201ENST00000614007 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 MIR5701-2-201ENST00000615634 82 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 AC240442.1-201ENST00000616055 283 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 U6.70-201ENST00000620287 104 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 MIR6828-201ENST00000636181 60 ntBASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CDC42SE1Q9NRR8 RNA5SP117-201ENST00000365294 118 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-187P-201ENST00000384139 106 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-318P-201ENST00000384283 103 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 SNORD38C-201ENST00000384381 69 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 SNORA26.5-201ENST00000391215 123 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU2-61P-201ENST00000411069 191 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 U8.19-201ENST00000459095 133 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 U8.22-201ENST00000459141 133 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU6-448P-201ENST00000517052 107 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU7-156P-201ENST00000517214 74 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 RNU7-181P-201ENST00000517234 74 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 AL589743.1-201ENST00000551932 2712 ntBASIC-0.28□□□□□ -2.45
CDC42SE1Q9NRR8 AC010332.2-201ENST00000613083 1904 ntBASIC-0.28□□□□□ -2.46
CDC42SE1Q9NRR8 RNA5SP325-201ENST00000363756 130 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 SNORD14E-201ENST00000364009 85 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-268P-201ENST00000364174 107 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 SNORA75-201ENST00000384158 137 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 SNORA72-201ENST00000384339 132 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-364P-201ENST00000384387 107 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 RNU4-55P-201ENST00000410731 137 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 RNU7-185P-201ENST00000459215 60 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 SNORA40.9-201ENST00000515895 93 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 ZNF519P2-201ENST00000557032 169 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 MIR5000-201ENST00000577717 103 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 MIR3672-201ENST00000584290 82 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 SCARNA15.3-201ENST00000626315 122 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 MIR1295B-201ENST00000636144 60 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.29□□□□□ -2.46
CDC42SE1Q9NRR8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 MIR208A-201ENST00000362287 71 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-874P-201ENST00000362390 105 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-161P-201ENST00000363051 106 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-324P-201ENST00000363957 106 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 SNORA63C-201ENST00000364578 129 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 SNORA24-201ENST00000384096 131 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 FGF7P8-201ENST00000402994 292 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 AL031003.1-201ENST00000404229 172 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-847P-201ENST00000411115 108 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 RN7SKP142-201ENST00000411236 328 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 AC005972.2-201ENST00000604690 348 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 SNORD38B-202ENST00000625943 69 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 AC068137.3-201ENST00000639191 341 ntBASIC-0.3□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 RNU1-93P-201ENST00000364704 169 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 RNA5SP128-201ENST00000365305 116 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-442P-201ENST00000383968 104 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 RNU6-306P-201ENST00000384617 107 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 MIR760-201ENST00000390220 80 ntBASIC-0.31□□□□□ -2.46
CDC42SE1Q9NRR8 SNORA26-201ENST00000391286 122 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms