Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC108210.2-201ENST00000503681 201 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 RNU4-57P-201ENST00000515980 135 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 RNU6-991P-201ENST00000516168 107 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 RNA5SP320-201ENST00000516263 124 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 RNU2-34P-201ENST00000516534 121 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 MIR378D2-201ENST00000580636 98 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 AC120024.3-201ENST00000603167 156 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 AL021707.8-201ENST00000609428 183 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 AP001340.1-201ENST00000624405 217 ntBASIC2.91□□□□□ -1.94
PDLIM7Q9NR12 Y_RNA.251-201ENST00000364551 99 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 RNU6-215P-201ENST00000365169 102 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 RNU6-1336P-201ENST00000383886 109 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 SNORA72-201ENST00000384339 132 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 AC010154.1-201ENST00000425857 269 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 MIR4438-201ENST00000585271 93 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 AL355297.2-201ENST00000604792 129 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 U4atac.1-201ENST00000618345 95 ntBASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM7Q9NR12 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 RNU1-22P-201ENST00000363334 158 ntBASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 RNU6-597P-201ENST00000365620 102 ntBASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 MTCO1P44-201ENST00000441935 243 ntBASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 Y_RNA.676-201ENST00000516393 96 ntBASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDLIM7Q9NR12 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RNU1-23P-201ENST00000363361 144 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 Y_RNA.203-201ENST00000364106 102 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 SNORD114-30-201ENST00000364448 72 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RNU6-1080P-201ENST00000383982 107 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RNU6-484P-201ENST00000384016 107 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 Y_RNA.432-201ENST00000384087 111 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RNU6-482P-201ENST00000391068 107 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RPS4XP11-201ENST00000446897 772 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 AC097462.1-201ENST00000514125 324 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RNU6-197P-201ENST00000516680 100 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 RNU7-172P-201ENST00000517125 64 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 AC090142.3-201ENST00000519012 385 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 U7.2-201ENST00000607576 63 ntBASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDLIM7Q9NR12 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 RNU6-915P-201ENST00000364943 103 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 MIR95-201ENST00000385072 81 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 MIR561-201ENST00000385216 97 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 RNU2-55P-201ENST00000411146 174 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 AL357134.1-201ENST00000445848 426 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 RN7SL297P-201ENST00000483161 293 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 RNU6-1299P-201ENST00000516316 100 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 SNORA48.11-201ENST00000517015 89 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 RPL23AP91-201ENST00000569211 455 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 U4.3-201ENST00000621047 82 ntBASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDLIM7Q9NR12 AP006437.1-201ENST00000641440 3685 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 RNU1-109P-201ENST00000383960 147 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 RNU6-44P-201ENST00000384045 107 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 MIR27B-201ENST00000385129 97 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 Y_RNA.584-201ENST00000391090 114 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 SNORD88.1-201ENST00000408684 91 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 AC245047.4-201ENST00000433189 144 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 AC245102.2-201ENST00000448956 180 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 RNU7-26P-201ENST00000458980 63 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 AC093259.1-201ENST00000509755 300 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 SNORA4.4-201ENST00000515921 135 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 RNU6-659P-201ENST00000516454 104 ntBASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDLIM7Q9NR12 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 RNU6-978P-201ENST00000364371 103 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 MIR1253-201ENST00000408273 105 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 AC123900.1-201ENST00000420390 96 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 AL035461.1-201ENST00000421490 332 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 RNU7-107P-201ENST00000459121 61 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 RNA5SP385-201ENST00000515947 110 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 uc_338.4-201ENST00000616635 176 ntBASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PDLIM7Q9NR12 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PDLIM7Q9NR12 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDLIM7Q9NR12 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms