Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 AC090821.2-201ENST00000523552 176 ntBASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRDM9Q9NQV7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 SNORA1.1-201ENST00000364671 133 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 Y_RNA.467-201ENST00000384297 102 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 MIR218-1-201ENST00000384999 110 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 Y_RNA.607-201ENST00000410597 98 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 RNU2-63P-201ENST00000410792 194 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 RNU7-113P-201ENST00000459273 62 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 RN7SL297P-201ENST00000483161 293 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 RN7SKP18-201ENST00000516005 275 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 SNORA31.4-201ENST00000516049 129 ntBASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRDM9Q9NQV7 AC092881.1-201ENST00000638218 2733 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 Y_RNA.99-201ENST00000363138 105 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 RNA5SP139-201ENST00000364340 117 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 SNORA57.3-201ENST00000411095 141 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 CYCSP35-201ENST00000451978 304 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 AL163195.1-201ENST00000496941 348 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 AC022695.1-201ENST00000522089 237 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 MIR1254-2-201ENST00000579553 63 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 ZNF861P-201ENST00000588126 639 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 AC244205.2-202ENST00000635781 342 ntBASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PRDM9Q9NQV7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.59□□□□□ -1.84
PRDM9Q9NQV7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.84
PRDM9Q9NQV7 MFSD8-233ENST00000641482 4860 ntBASIC3.59□□□□□ -1.84
PRDM9Q9NQV7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 CYCSP19-201ENST00000411715 316 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 ARF4P2-201ENST00000430209 526 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 RN7SL93P-201ENST00000463035 293 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 RN7SL504P-201ENST00000494496 287 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 SCARNA14-201ENST00000516903 136 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 RNU6-1006P-201ENST00000516998 103 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 IGLV3-17-201ENST00000519099 244 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 AC087499.8-201ENST00000578406 226 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 MIR5187-201ENST00000583479 76 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 SNORA62.6-201ENST00000606322 83 ntBASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.58□□□□□ -1.84
PRDM9Q9NQV7 Y_RNA.4-201ENST00000362333 112 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 RNU6-509P-201ENST00000363519 107 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 SNORD58A-201ENST00000383875 65 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 RNU6-616P-201ENST00000384353 107 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 U8.15-201ENST00000390947 134 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 RNA5SP424-201ENST00000390988 115 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 RNA5SP143-201ENST00000516936 115 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 AC007536.1-201ENST00000533382 349 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 AC006130.2-201ENST00000586202 326 ntBASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRDM9Q9NQV7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6-424P-201ENST00000384367 105 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 MIR554-201ENST00000384874 96 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 MIR592-201ENST00000384959 97 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6-1319P-201ENST00000390855 104 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6-747P-201ENST00000390928 104 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6-241P-201ENST00000391148 104 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6ATAC-201ENST00000408749 126 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 Y_RNA.611-201ENST00000410682 108 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 RNU6-177P-201ENST00000411257 104 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 AL135938.1-201ENST00000443141 297 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 SEM1P1-201ENST00000506694 209 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 AC027279.3-201ENST00000625055 122 ntBASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PRDM9Q9NQV7 AC073346.2-201ENST00000624724 2058 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms