Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 MIR934-201ENST00000401241 83 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 AC117454.1-201ENST00000491120 168 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 AC024405.2-202ENST00000532731 184 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 AC127455.1-201ENST00000565496 145 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDH12Q9NPG4 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 RNU6-801P-201ENST00000364087 105 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 RNU6-203P-201ENST00000384038 104 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 AC099513.1-201ENST00000490423 301 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 MIR2681-201ENST00000581814 105 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDH12Q9NPG4 U8.7-201ENST00000364940 136 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 RNU6-144P-201ENST00000383951 107 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 SNORA64-201ENST00000384674 134 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 MIR194-1-201ENST00000384892 85 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 AL161935.2-201ENST00000414627 60 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 MTCYBP9-201ENST00000431021 303 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 AL135790.2-201ENST00000437701 267 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 HSPE1P24-201ENST00000450782 238 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 RNU7-141P-201ENST00000459304 62 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 OR9P1P-201ENST00000496431 281 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 SNORD3E-202ENST00000627253 216 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDH12Q9NPG4 UBE2WP1-201ENST00000362030 340 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 SNORD68-201ENST00000363214 84 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 Y_RNA.133-201ENST00000363428 110 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 RNU4-41P-201ENST00000364426 143 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 HMGN1P7-201ENST00000491722 313 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 AL161670.1-201ENST00000554348 137 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 AP001282.2-201ENST00000616149 309 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 MIR8063-201ENST00000621930 81 ntBASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PCDH12Q9NPG4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 Y_RNA.44-201ENST00000362676 108 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 Y_RNA.288-201ENST00000364854 92 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 MIR513A1-201ENST00000385138 129 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 MIR660-201ENST00000385235 97 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 MTCO2P33-201ENST00000402100 465 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 SNORA36B-201ENST00000410438 131 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 MIR4422-201ENST00000581938 83 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 JPX_2.1-201ENST00000614161 69 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.16□□□□□ -2.06
PCDH12Q9NPG4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PCDH12Q9NPG4 MIR126-201ENST00000362291 85 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 RNU6-1272P-201ENST00000362776 107 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 RNU6-424P-201ENST00000384367 105 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 RNU6-763P-201ENST00000390865 106 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 SNORA26.5-201ENST00000391215 123 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 MIR1261-201ENST00000408659 82 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 RNU6-437P-201ENST00000459408 95 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 RNA5SP168-201ENST00000516642 112 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 AC095038.3-201ENST00000634439 195 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 WWP1P1-201ENST00000466609 2769 ntBASIC2.15□□□□□ -2.07
PCDH12Q9NPG4 RNU6-1205P-201ENST00000363625 106 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 Y_RNA.483-201ENST00000384380 101 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 SNORA48.3-201ENST00000391081 134 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 MTND3P2-201ENST00000438452 342 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 AC005908.1-201ENST00000468701 347 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 DEFB122-202ENST00000569013 197 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 AL591926.4-201ENST00000616895 298 ntBASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PCDH12Q9NPG4 RNU6-674P-201ENST00000363831 107 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 U8.5-201ENST00000364528 136 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 RNA5SP259-201ENST00000365541 109 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 RNU6-662P-201ENST00000384253 104 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 MT-TW-201ENST00000387382 68 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 RNA5SP338-201ENST00000410495 85 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 BTF3P11-201ENST00000426582 477 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 CALM2P4-201ENST00000430810 426 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 Z98949.2-201ENST00000440996 144 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 CYCTP-201ENST00000504253 315 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 AC079140.2-201ENST00000506193 142 ntBASIC2.13□□□□□ -2.07
PCDH12Q9NPG4 RNU7-12P-201ENST00000516030 62 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 397 ms