Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC068647.2-201ENST00000637380 353 ntBASIC1.79□□□□□ -2.12
PCDH9Q9HC56 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PCDH9Q9HC56 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PCDH9Q9HC56 RNU6-801P-201ENST00000364087 105 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 RNU6-740P-201ENST00000364734 105 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.310-201ENST00000365063 113 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.447-201ENST00000384184 113 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 SNORA48.1-201ENST00000390879 135 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 RNU2-7P-201ENST00000410794 178 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 RNU2-14P-201ENST00000411053 191 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC010154.1-201ENST00000425857 269 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 HSPE1P13-201ENST00000451143 297 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC233266.1-201ENST00000454518 96 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 Y_RNA.680-201ENST00000516441 93 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC242852.1-201ENST00000612151 96 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 U2.14-201ENST00000615943 113 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC244015.1-201ENST00000622301 99 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
PCDH9Q9HC56 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.77□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.65-201ENST00000362846 100 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 RNU6-1019P-201ENST00000364424 107 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.267-201ENST00000364679 109 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 RNU6-117P-201ENST00000365415 107 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.368-201ENST00000365547 113 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.456-201ENST00000384232 111 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 RNU6-1289P-201ENST00000384431 106 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 MIR515-2-201ENST00000384883 83 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 MIR515-1-201ENST00000384884 83 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 MTCO2P33-201ENST00000402100 465 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 RNU6-651P-201ENST00000411040 105 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 BTF3P11-201ENST00000426582 477 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 MTND2P29-201ENST00000438595 412 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 AC091021.1-201ENST00000468051 388 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 AC117454.1-201ENST00000491120 168 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 MTND1P19-201ENST00000511780 315 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 RNU6-1271P-201ENST00000517049 105 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 AC136628.3-201ENST00000521868 290 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.77□□□□□ -2.13
PCDH9Q9HC56 AC015720.1-201ENST00000565251 277 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 AC006006.1-201ENST00000603082 144 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 AC004832.4-201ENST00000608952 331 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
PCDH9Q9HC56 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PCDH9Q9HC56 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.188-201ENST00000363952 111 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.352-201ENST00000365439 102 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 RNU6-763P-201ENST00000390865 106 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 SNORA26.5-201ENST00000391215 123 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 MIR548H3-201ENST00000408771 118 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.621-201ENST00000411065 96 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 AC245047.4-201ENST00000433189 144 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 U8.19-201ENST00000459095 133 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.76□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.679-201ENST00000516416 91 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 AC024995.1-201ENST00000523014 93 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 AC005972.2-201ENST00000604690 348 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.76□□□□□ -2.13
PCDH9Q9HC56 snoU18.1-201ENST00000629629 71 ntBASIC1.76□□□□□ -2.13
PCDH9Q9HC56 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH9Q9HC56 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCDH9Q9HC56 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
PCDH9Q9HC56 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.60-201ENST00000362831 98 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.275-201ENST00000364726 110 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 SNORA20.1-201ENST00000364790 130 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 U8.7-201ENST00000364940 136 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.416-201ENST00000384014 113 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.562-201ENST00000384695 113 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.590-201ENST00000410140 107 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.618-201ENST00000410949 107 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 AL162725.1-201ENST00000435405 301 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 AL606517.2-201ENST00000442855 241 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 RNU6-1096P-201ENST00000517089 102 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 MIR4643-201ENST00000577473 78 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 POLR3GP1-201ENST00000594073 261 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 MIR6079-201ENST00000635807 62 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 AC018630.2-201ENST00000534866 2403 ntBASIC1.75□□□□□ -2.13
PCDH9Q9HC56 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 RPS4XP11-201ENST00000446897 772 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 RNU7-141P-201ENST00000459304 62 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.637-201ENST00000459424 114 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 RPS26P45-201ENST00000471748 340 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 RNU6-250P-201ENST00000516958 103 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.74□□□□□ -2.13
PCDH9Q9HC56 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 AL162424.1-201ENST00000602325 221 ntBASIC1.74□□□□□ -2.13
PCDH9Q9HC56 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PCDH9Q9HC56 UBE2WP1-201ENST00000362030 340 ntBASIC1.73□□□□□ -2.13
PCDH9Q9HC56 RNU6-1272P-201ENST00000362776 107 ntBASIC1.73□□□□□ -2.13
PCDH9Q9HC56 Y_RNA.217-201ENST00000364214 105 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms