Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
USP29Q9HBJ7 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 RNU6-23P-201ENST00000363283 107 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.199-201ENST00000364014 102 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.304-201ENST00000365011 112 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.15□□□□□ -2.07
USP29Q9HBJ7 RNU2-64P-201ENST00000411315 191 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 AL162725.1-201ENST00000435405 301 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
USP29Q9HBJ7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.15□□□□□ -2.07
USP29Q9HBJ7 RNU6-548P-201ENST00000517083 115 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 RNU7-172P-201ENST00000517125 64 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.15□□□□□ -2.07
USP29Q9HBJ7 MIR5692C2-201ENST00000577959 77 ntBASIC2.15□□□□□ -2.07
USP29Q9HBJ7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
USP29Q9HBJ7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USP29Q9HBJ7 RNU6-862P-201ENST00000362804 105 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 RNU6-653P-201ENST00000363074 106 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 U8.7-201ENST00000364940 136 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 RNU6-1323P-201ENST00000384025 107 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.785-201ENST00000384290 109 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 MIR518A2-201ENST00000384966 87 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 AC002984.1-201ENST00000591692 448 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 AC005972.2-201ENST00000604690 348 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 AL365265.1-201ENST00000621045 234 ntBASIC2.14□□□□□ -2.07
USP29Q9HBJ7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USP29Q9HBJ7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
USP29Q9HBJ7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
USP29Q9HBJ7 MIR411-201ENST00000362239 96 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.83-201ENST00000363005 113 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 RNU6-899P-201ENST00000363947 107 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 SNORA64-201ENST00000384674 134 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 MTCO2P33-201ENST00000402100 465 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AL023284.1-201ENST00000403956 276 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AL355497.1-201ENST00000406262 551 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 CST2P1-201ENST00000425770 87 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AC010154.1-201ENST00000425857 269 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 RNU7-99P-201ENST00000516271 62 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 RNU7-115P-201ENST00000516433 55 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.700-201ENST00000516806 100 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AC005786.1-201ENST00000588553 154 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AC007229.1-201ENST00000590455 412 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AP003357.1-201ENST00000604497 148 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AC068647.2-201ENST00000637380 353 ntBASIC2.13□□□□□ -2.07
USP29Q9HBJ7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
USP29Q9HBJ7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AC131280.1-202ENST00000624067 4211 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.297-201ENST00000364950 91 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 MT-TR-201ENST00000387439 65 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AC055731.1-201ENST00000474387 401 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AC117454.1-201ENST00000491120 168 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 RNU6-1278P-201ENST00000516130 107 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 RNA5SP458-201ENST00000516188 119 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 CBX3P4-201ENST00000538909 354 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AL359075.3-201ENST00000613288 217 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 MIR548AY-201ENST00000617669 107 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
USP29Q9HBJ7 RNU6-136P-201ENST00000384663 107 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 MIR597-201ENST00000384968 97 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 RPS26P45-201ENST00000471748 340 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.11□□□□□ -2.07
USP29Q9HBJ7 RNY3P16-201ENST00000516338 101 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 AC100767.1-201ENST00000528178 123 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 AC024405.2-202ENST00000532731 184 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
USP29Q9HBJ7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USP29Q9HBJ7 MIR764-201ENST00000390811 85 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
USP29Q9HBJ7 HSPE1P21-201ENST00000438283 308 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 MTND2P29-201ENST00000438595 412 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 RPS4XP11-201ENST00000446897 772 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 RNU1-40P-201ENST00000516816 164 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 RNU1-97P-201ENST00000516872 164 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 AP005660.1-201ENST00000522972 293 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 AC024995.1-201ENST00000523014 93 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 AC127455.1-201ENST00000565496 145 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 AC073413.2-201ENST00000604332 360 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
USP29Q9HBJ7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
USP29Q9HBJ7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
USP29Q9HBJ7 RNA5SP99-201ENST00000364020 114 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 Y_RNA.262-201ENST00000364641 102 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 MIR515-2-201ENST00000384883 83 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 MIR515-1-201ENST00000384884 83 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 SNORA26.9-201ENST00000391322 122 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 SNORA36B-201ENST00000410438 131 ntBASIC2.09□□□□□ -2.07
USP29Q9HBJ7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms