Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.112-201ENST00000363250 102 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.172-201ENST00000363765 102 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.331-201ENST00000365267 102 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 SNORD14.1-201ENST00000365609 90 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.439-201ENST00000384119 94 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.471-201ENST00000384312 102 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.509-201ENST00000384506 99 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 RPL23AP36-201ENST00000413895 458 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 MCFD2P1-201ENST00000417812 300 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.27□□□□□ -2.21
UBQLN3Q9H347 RPS4XP11-201ENST00000446897 772 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AC009474.2-201ENST00000451383 136 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 U8.20-201ENST00000459445 131 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AC108729.3-201ENST00000513484 108 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AC040926.1-201ENST00000530195 238 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AL512310.8-201ENST00000550183 120 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AC019288.1-201ENST00000557918 224 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.27□□□□□ -2.21
UBQLN3Q9H347 AL050343.2-201ENST00000607338 280 ntBASIC1.27□□□□□ -2.21
UBQLN3Q9H347 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBQLN3Q9H347 RNU6-199P-201ENST00000362954 107 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.143-201ENST00000363520 106 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 RNU4-41P-201ENST00000364426 143 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.424-201ENST00000384063 103 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 AL390729.2-201ENST00000416137 156 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 Z98949.2-201ENST00000440996 144 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 SNRPGP13-201ENST00000442212 177 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 RN7SKP88-201ENST00000516847 250 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 AL358944.1-201ENST00000528537 144 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 C8orf59P2-201ENST00000603441 271 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 7SK.8-201ENST00000612110 250 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 7SK.11-201ENST00000615477 250 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 7SK.13-201ENST00000622040 250 ntBASIC1.26□□□□□ -2.21
UBQLN3Q9H347 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
UBQLN3Q9H347 SNORD68-201ENST00000363214 84 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RNU4-50P-201ENST00000364361 141 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 SNORA25.8-201ENST00000364831 128 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.445-201ENST00000384168 102 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.462-201ENST00000384268 102 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RNU6-937P-201ENST00000384325 106 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RNU4-30P-201ENST00000410245 143 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RNU6-855P-201ENST00000410395 104 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.604-201ENST00000410574 102 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RPL39P38-201ENST00000467018 153 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 RNU6-1116P-201ENST00000517269 99 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 AC011604.1-201ENST00000545978 196 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 MIR4423-201ENST00000580922 80 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 AL359821.1-201ENST00000605519 182 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 AC004832.4-201ENST00000608952 331 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 AC090574.1-201ENST00000623186 233 ntBASIC1.25□□□□□ -2.21
UBQLN3Q9H347 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.25□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.31-201ENST00000362574 102 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.395-201ENST00000383945 109 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 RNU6-21P-201ENST00000384710 107 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 MIR1302-11-201ENST00000408051 138 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 MIR1302-9-201ENST00000408365 138 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 MIR1302-10-201ENST00000408734 138 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.24□□□□□ -2.21
UBQLN3Q9H347 MTND4P19-201ENST00000446659 478 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 AC093852.1-201ENST00000503587 266 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 RNU6-1053P-201ENST00000515930 101 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.713-201ENST00000517013 96 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UBQLN3Q9H347 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 DEFB117-201ENST00000602356 141 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 AC005972.2-201ENST00000604690 348 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 MIR1302-2-201ENST00000607096 138 ntBASIC1.24□□□□□ -2.21
UBQLN3Q9H347 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UBQLN3Q9H347 SNORD42.2-201ENST00000365570 69 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 RNU6-1105P-201ENST00000384774 107 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
UBQLN3Q9H347 RNU6-710P-201ENST00000410424 105 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 RNU6-321P-201ENST00000410912 106 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
UBQLN3Q9H347 DYNLT3P2-201ENST00000442517 295 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 RPS20P10-201ENST00000451209 253 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.639-201ENST00000458981 102 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 RNU6-475P-201ENST00000516073 104 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 AL513534.2-201ENST00000603836 250 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 AC068647.2-201ENST00000637380 353 ntBASIC1.23□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.460-201ENST00000384255 102 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 RNU6-163P-201ENST00000384396 106 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 Y_RNA.551-201ENST00000384661 102 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 MLLT10P1-201ENST00000418346 262 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 PIGPP3-201ENST00000425307 415 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AC024067.1-201ENST00000426199 223 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AC104332.1-201ENST00000440471 797 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.22□□□□□ -2.21
UBQLN3Q9H347 SNORA25.10-201ENST00000515926 124 ntBASIC1.22□□□□□ -2.21
UBQLN3Q9H347 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms