Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SNORA31.17-201ENST00000516953 127 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 AP002004.2-201ENST00000531656 154 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 AC005972.2-201ENST00000604690 348 ntBASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RTFDC1Q9BY42 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 RNU6-806P-201ENST00000365147 105 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.461-201ENST00000384263 103 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 SNORA67.5-201ENST00000391036 107 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 RNU4-62P-201ENST00000410125 130 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 MTCYBP9-201ENST00000431021 303 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 snoU13.27-201ENST00000459278 104 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 AC098869.1-201ENST00000481627 292 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 RNU2-56P-201ENST00000516826 190 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 MIR4448-201ENST00000584360 86 ntBASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RTFDC1Q9BY42 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 RNU4-80P-201ENST00000363200 141 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 RNU6-414P-201ENST00000363705 104 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 RNA5SP37-201ENST00000365420 130 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.541-201ENST00000384640 113 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 HSPE1P9-201ENST00000440046 311 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 RPS20P10-201ENST00000451209 253 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 MIR4709-201ENST00000577272 72 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 AL096840.1-201ENST00000603287 93 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 AL162730.1-201ENST00000605734 292 ntBASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RTFDC1Q9BY42 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 MIR335-201ENST00000362173 94 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.133-201ENST00000363428 110 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 RNU6-1323P-201ENST00000384025 107 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.418-201ENST00000384029 102 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 MTND3P2-201ENST00000438452 342 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 AC091021.1-201ENST00000468051 388 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 SERF1AP1-201ENST00000514575 187 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 RNU6-570P-201ENST00000517051 105 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 RNU6-1096P-201ENST00000517089 102 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 RNA5SP437-201ENST00000517249 129 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 AC136628.3-201ENST00000521868 290 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 AC015720.1-201ENST00000565251 277 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 AL359821.1-201ENST00000605519 182 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 AC004832.4-201ENST00000608952 331 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.26-201ENST00000362539 101 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 Y_RNA.310-201ENST00000365063 113 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 RNA5SP109-201ENST00000391010 116 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 AL034345.1-201ENST00000407768 123 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 RNA5SP511-201ENST00000410487 115 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 MTCO1P5-201ENST00000433573 344 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 RNU6-191P-201ENST00000516295 94 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 RNU6-1338P-201ENST00000516328 91 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 MIR3145-201ENST00000580727 82 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 AC091178.2-201ENST00000584401 117 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 AC022217.4-201ENST00000604389 163 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 MIR8081-201ENST00000611533 95 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 AL078604.3-201ENST00000615580 211 ntBASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.22□□□□□ -2.05
RTFDC1Q9BY42 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 AL391987.6-201ENST00000305671 199 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 Y_RNA.376-201ENST00000365638 108 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 MIR215-201ENST00000384858 110 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 HSPE1P21-201ENST00000438283 308 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 RPS27P1-201ENST00000450552 247 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 RNU6-63P-201ENST00000516690 95 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 MIR4303-201ENST00000581299 66 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 MIR8054-201ENST00000620877 86 ntBASIC2.21□□□□□ -2.06
RTFDC1Q9BY42 AC100821.1-201ENST00000523153 2479 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 Y_RNA.267-201ENST00000364679 109 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 Y_RNA.288-201ENST00000364854 92 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 SNORA72-201ENST00000384339 132 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 Y_RNA.518-201ENST00000384552 113 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 HMGN2P19-201ENST00000425149 265 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 RNU7-34P-201ENST00000459394 64 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 AC005840.1-201ENST00000498412 377 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 AL161670.1-201ENST00000554348 137 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 MIR7111-201ENST00000619751 72 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
RTFDC1Q9BY42 RNY1P10-201ENST00000363268 113 ntBASIC2.19□□□□□ -2.06
RTFDC1Q9BY42 Y_RNA.265-201ENST00000364677 108 ntBASIC2.19□□□□□ -2.06
RTFDC1Q9BY42 SNORD116-13-201ENST00000384408 92 ntBASIC2.19□□□□□ -2.06
RTFDC1Q9BY42 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RTFDC1Q9BY42 RNU6-440P-201ENST00000390882 105 ntBASIC2.19□□□□□ -2.06
RTFDC1Q9BY42 RNA5SP482-201ENST00000391269 118 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms