Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 RPL23AP6-201ENST00000446637 472 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 RNU7-120P-201ENST00000459334 63 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 AL591926.4-201ENST00000616895 298 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAIPQ9BWF2 RNU6-1084P-201ENST00000362498 107 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 Y_RNA.796-201ENST00000364268 102 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 Y_RNA.799-201ENST00000364992 102 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 RNU6-296P-201ENST00000384608 107 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 Y_RNA.572-201ENST00000384757 98 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 MIR181B1-201ENST00000385240 110 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 Y_RNA.587-201ENST00000391210 103 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 RNA5SP21-201ENST00000410917 96 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 RNU2-64P-201ENST00000411315 191 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 RPS29P6-201ENST00000438196 145 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 MIR4298-201ENST00000584380 73 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 AL049861.1-201ENST00000603130 150 ntBASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.06□□□□□ -1.92
TRAIPQ9BWF2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 AC068700.1-201ENST00000565862 3754 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 AL138827.1-201ENST00000402666 306 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 SNORA79-201ENST00000408376 140 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 SNORD88.1-201ENST00000408684 91 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 RN7SKP101-201ENST00000411376 320 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 AC087685.1-201ENST00000587507 141 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 AL049779.4-201ENST00000604500 156 ntBASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.05□□□□□ -1.92
TRAIPQ9BWF2 RNU1-35P-201ENST00000362782 153 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 snoU2_19.4-201ENST00000364329 80 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 AL606845.1-201ENST00000404881 255 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 RPL30P13-201ENST00000418873 348 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 AC107393.1-201ENST00000512403 346 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 Y_RNA.662-201ENST00000516028 97 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 RNU6-126P-201ENST00000516685 103 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 RNA5SP437-201ENST00000517249 129 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 uc_338.4-201ENST00000616635 176 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 AL365361.1-201ENST00000566942 3481 ntBASIC3.04□□□□□ -1.92
TRAIPQ9BWF2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 RNU6-728P-201ENST00000365375 104 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 RNU6-360P-201ENST00000390944 104 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 SNORD109B-201ENST00000458961 67 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 SNORD109A-201ENST00000459128 67 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 SNORA31.17-201ENST00000516953 127 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 AL773524.1-201ENST00000614065 229 ntBASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAIPQ9BWF2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 ZNF658B-202ENST00000615961 3375 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 MIR449A-201ENST00000362113 91 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 RNU1-112P-201ENST00000364401 164 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 SNORA4.2-201ENST00000365313 147 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 AL590004.2-201ENST00000404787 371 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 AC244636.1-201ENST00000421152 228 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 AL121914.1-201ENST00000450188 156 ntBASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.02□□□□□ -1.93
TRAIPQ9BWF2 AL136360.1-201ENST00000503377 1900 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 SNORA16B-201ENST00000364674 135 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 RNU6-1031P-201ENST00000384773 107 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 RNU6-578P-201ENST00000390980 103 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 RPS27AP9-201ENST00000477681 438 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 OR9P1P-201ENST00000496431 281 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 RNA5SP76-201ENST00000516277 87 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 SNORA31.10-201ENST00000516482 106 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 AC004486.1-201ENST00000546846 233 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 MIR4662B-201ENST00000579498 81 ntBASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRAIPQ9BWF2 MIR26A1-201ENST00000362205 77 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 RNU6-859P-201ENST00000362728 107 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 RNU6-414P-201ENST00000363705 104 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 snoU2-30.1-201ENST00000365012 70 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 MT-TT-201ENST00000387460 66 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 SNORA12.1-201ENST00000390873 148 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 SNORA26-201ENST00000391286 122 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3□□□□□ -1.93
TRAIPQ9BWF2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3□□□□□ -1.93
TRAIPQ9BWF2 RNU6-453P-201ENST00000516819 85 ntBASIC3□□□□□ -1.93
TRAIPQ9BWF2 AC022559.1-201ENST00000520905 205 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms