Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 SNORA7.1-201ENST00000363750 139 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNU6-407P-201ENST00000365280 104 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNU6-574P-201ENST00000384265 107 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 MT-TW-201ENST00000387382 68 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 MIR1302-6-201ENST00000408466 90 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNU6-1203P-201ENST00000410703 110 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 POLR2KP2-201ENST00000438155 177 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RPS27P22-201ENST00000478056 241 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 HMGN1P7-201ENST00000491722 313 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP480-201ENST00000516840 109 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 AL161670.1-201ENST00000554348 137 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 MIR3145-201ENST00000580727 82 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 MIR6734-201ENST00000621166 68 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RTP3Q9BQQ7 AC010615.1-201ENST00000594254 1764 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.16-201ENST00000362421 102 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 RNU6-60P-201ENST00000364792 103 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.396-201ENST00000383949 103 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.461-201ENST00000384263 103 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.483-201ENST00000384380 101 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.569-201ENST00000384749 103 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 RN7SKP101-201ENST00000411376 320 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 AC245047.4-201ENST00000433189 144 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 MRPS10P1-201ENST00000448483 130 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP57-201ENST00000459463 123 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 TRBVB-201ENST00000477100 408 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP20-201ENST00000515976 84 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 MIR4503-201ENST00000582187 83 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 DEFB117-201ENST00000602356 141 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 AC069114.2-201ENST00000604699 304 ntBASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
RTP3Q9BQQ7 RNU6-112P-201ENST00000363599 104 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU1-42P-201ENST00000364033 160 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU6-290P-201ENST00000365212 101 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU6-196P-201ENST00000384315 107 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU6-505P-201ENST00000384427 107 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 MIR515-2-201ENST00000384883 83 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 MIR515-1-201ENST00000384884 83 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 MIR873-201ENST00000401120 77 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 MIR1302-3-201ENST00000408128 138 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 SUMO1P2-201ENST00000452524 304 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 AC010409.1-201ENST00000487382 476 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RNU7-128P-201ENST00000517247 62 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 DEFB108E-201ENST00000524692 240 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 AC024614.2-201ENST00000577584 372 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 MIR4438-201ENST00000585271 93 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 RMST_2.1-201ENST00000617263 136 ntBASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.69□□□□□ -2.14
RTP3Q9BQQ7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 SNORD114-7-201ENST00000362520 77 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.144-201ENST00000363521 113 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNU6-271P-201ENST00000363858 105 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 Y_RNA.418-201ENST00000384029 102 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNU6-472P-201ENST00000384299 107 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNU6-463P-201ENST00000384340 107 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 SNORA67.6-201ENST00000391093 99 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 EBAG9P1-201ENST00000418955 543 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 SNORA70.12-201ENST00000516084 153 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNU6-1338P-201ENST00000516328 91 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNU1-142P-201ENST00000516682 145 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP102-201ENST00000516865 106 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 SCARNA24.2-201ENST00000516968 130 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 AC024995.1-201ENST00000523014 93 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 AL359075.3-201ENST00000613288 217 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 AP001282.2-201ENST00000616149 309 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 7SK.10-201ENST00000621414 298 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 AC127459.3-201ENST00000624328 466 ntBASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
RTP3Q9BQQ7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RNU4-80P-201ENST00000363200 141 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RNU1-22P-201ENST00000363334 158 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RNA5SP323-201ENST00000391094 133 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RNU2-61P-201ENST00000411069 191 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 RPS26P55-201ENST00000471178 356 ntBASIC1.67□□□□□ -2.14
RTP3Q9BQQ7 AL163195.1-201ENST00000496941 348 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms