Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MTND2P14-201ENST00000482139 351 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 SNORA18.4-201ENST00000516440 124 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 RNA5SP268-201ENST00000516828 124 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 AC026371.1-201ENST00000551867 419 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 uc_338.6-201ENST00000613544 171 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 U6.90-201ENST00000614007 104 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 U6.70-201ENST00000620287 104 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 MTND1P7-201ENST00000632801 297 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 AC010332.2-201ENST00000613083 1904 ntBASIC-0.33□□□□□ -2.46
LYSMD1Q96S90 SNORD113-7-201ENST00000363762 77 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 RNU6-248P-201ENST00000410720 107 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 PDCL2P1-201ENST00000419302 352 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 CYCSP46-201ENST00000423569 204 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 SNORD42A-201ENST00000459584 64 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 RPL17P19-201ENST00000489069 552 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 AC010486.3-201ENST00000511602 785 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 POLR3GP2-201ENST00000588366 668 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 AC010525.2-201ENST00000590920 195 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 AC073534.2-201ENST00000620377 381 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 MIR499B-201ENST00000636498 73 ntBASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
LYSMD1Q96S90 RNU6-82P-201ENST00000363970 107 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 RNU6-756P-201ENST00000383997 107 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 ELOCP21-201ENST00000412558 336 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 MTCO2P27-201ENST00000420740 428 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 SNRPGP10-201ENST00000432323 225 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 RNU7-159P-201ENST00000459284 62 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 RNA5SP401-201ENST00000515920 127 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 RNU6-469P-201ENST00000516253 101 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 AC005176.2-201ENST00000596933 147 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 AC092807.2-201ENST00000609367 243 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 MIR7107-201ENST00000611489 80 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 uc_338.4-201ENST00000616635 176 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 AF246928.1-201ENST00000623768 87 ntBASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.35□□□□□ -2.47
LYSMD1Q96S90 RNU4-21P-201ENST00000362802 126 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 SNORD14E-201ENST00000364009 85 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 SNORD38C-201ENST00000384381 69 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 MIR125B2-201ENST00000385128 89 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 AC005042.3-201ENST00000453230 174 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 SNORA25.10-201ENST00000515926 124 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 RNU7-156P-201ENST00000517214 74 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 RNU7-181P-201ENST00000517234 74 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 AC100830.2-201ENST00000581636 240 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 AC090616.2-202ENST00000584248 222 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 MIR4791-201ENST00000607666 84 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 FAM157A-202ENST00000615155 405 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 AC240442.1-201ENST00000616055 283 ntBASIC-0.36□□□□□ -2.47
LYSMD1Q96S90 RNU6-281P-201ENST00000384212 103 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 MIR1257-201ENST00000408490 117 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 MIR548H2-201ENST00000408874 88 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 USP9YP16-201ENST00000430287 407 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 MTND3P23-201ENST00000431980 347 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 USP9YP23-201ENST00000455085 407 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 RNU7-125P-201ENST00000458760 62 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 ACA59.1-201ENST00000515966 143 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 RNU4-49P-201ENST00000516080 140 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 RNU6-448P-201ENST00000517052 107 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 MIR1295B-201ENST00000636144 60 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 AC099654.12-201ENST00000639868 649 ntBASIC-0.37□□□□□ -2.47
LYSMD1Q96S90 RNU6-454P-201ENST00000364292 107 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 U8.7-201ENST00000364940 136 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 SNORD114-12-201ENST00000365400 75 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 U8.17-201ENST00000391292 132 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 AC090844.1-201ENST00000422019 156 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 SUMO1P3-201ENST00000439961 304 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 RNU7-175P-201ENST00000515915 61 ntBASIC-0.38□□□□□ -2.47
LYSMD1Q96S90 RNU6-759P-201ENST00000516740 103 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms