Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC091144.1-201ENST00000519573 138 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.99□□□□□ -2.57
IFT140Q96RY7 MIR148A-201ENST00000362215 68 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 SNORD73A-201ENST00000386062 65 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 SNORA75.1-201ENST00000391130 148 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 MTCYBP4-201ENST00000401524 249 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1□□□□□ -2.57
IFT140Q96RY7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1□□□□□ -2.57
IFT140Q96RY7 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1□□□□□ -2.57
IFT140Q96RY7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1□□□□□ -2.57
IFT140Q96RY7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1□□□□□ -2.57
IFT140Q96RY7 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 U8.21-201ENST00000459536 136 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 RPL23AP75-201ENST00000491601 451 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 RNU6-135P-201ENST00000516769 101 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1□□□□□ -2.57
IFT140Q96RY7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1□□□□□ -2.57
IFT140Q96RY7 Z94722.1-201ENST00000604328 474 ntBASIC-1□□□□□ -2.57
IFT140Q96RY7 RNU6-117P-201ENST00000365415 107 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 SNORA20.2-201ENST00000383922 131 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 MIR522-201ENST00000385071 87 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.01□□□□□ -2.57
IFT140Q96RY7 AC091179.3-201ENST00000474761 144 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 MIR5706-201ENST00000579841 80 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 MIR4791-201ENST00000607666 84 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 U7.6-201ENST00000610841 64 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.01□□□□□ -2.57
IFT140Q96RY7 SNORD115-8-201ENST00000363856 82 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 SNORD115-38-201ENST00000365037 82 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 SNORD28-201ENST00000384706 75 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 SCARNA18-201ENST00000459004 134 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 MTCO3P23-201ENST00000561363 289 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 MIR3684-201ENST00000579779 74 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 MIR4775-201ENST00000581168 75 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.02□□□□□ -2.57
IFT140Q96RY7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 MIR198-201ENST00000637333 62 ntBASIC-1.02□□□□□ -2.57
IFT140Q96RY7 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 RNU6-169P-201ENST00000365336 107 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 RNU6-811P-201ENST00000384069 107 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 MIR518F-201ENST00000384973 87 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 AC073464.1-201ENST00000429823 534 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 AC091959.1-201ENST00000495857 238 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 AC138749.4-201ENST00000563970 127 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 AC080013.3-201ENST00000606839 578 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 MIR6740-201ENST00000618268 113 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 AL049777.1-201ENST00000622740 518 ntBASIC-1.03□□□□□ -2.57
IFT140Q96RY7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.03□□□□□ -2.57
IFT140Q96RY7 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.04□□□□□ -2.58
IFT140Q96RY7 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.04□□□□□ -2.58
IFT140Q96RY7 RNU6-855P-201ENST00000410395 104 ntBASIC-1.04□□□□□ -2.58
IFT140Q96RY7 AC109327.2-201ENST00000448339 378 ntBASIC-1.04□□□□□ -2.58
IFT140Q96RY7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.04□□□□□ -2.58
IFT140Q96RY7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.04□□□□□ -2.58
IFT140Q96RY7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.04□□□□□ -2.58
IFT140Q96RY7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
IFT140Q96RY7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.04□□□□□ -2.58
IFT140Q96RY7 AC005771.1-201ENST00000585581 349 ntBASIC-1.04□□□□□ -2.58
IFT140Q96RY7 MIR101-2-201ENST00000362195 79 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 SNORD50B-201ENST00000364995 70 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 MIR563-201ENST00000385080 79 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 U8.17-201ENST00000391292 132 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AC090844.1-201ENST00000422019 156 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 RNU6-329P-201ENST00000459618 107 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AC016550.1-201ENST00000505348 785 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.05□□□□□ -2.58
IFT140Q96RY7 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 RNU6-489P-201ENST00000618289 107 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 SEPT14P19-203ENST00000633205 211 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 RNY3-201ENST00000365484 102 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 SNORD38C-201ENST00000384381 69 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AL008987.1-201ENST00000415528 237 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AC010486.3-201ENST00000511602 785 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 SNORA31.14-201ENST00000516728 116 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 MTATP6P25-201ENST00000574491 261 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 MIR4677-201ENST00000584153 80 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 MIR4639-201ENST00000584938 69 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AC125232.2-201ENST00000592457 143 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 AC244669.1-204ENST00000621564 178 ntBASIC-1.05□□□□□ -2.58
IFT140Q96RY7 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 MIR601-201ENST00000385256 79 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AL354751.2-201ENST00000415471 210 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AC105417.1-201ENST00000514691 285 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.06□□□□□ -2.58
IFT140Q96RY7 MIR4436A-201ENST00000585278 85 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms