Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.69□□□□□ -2.68
CFAP54Q96N23 uc_338.4-201ENST00000616635 176 ntBASIC-1.69□□□□□ -2.68
CFAP54Q96N23 RNU6-440P-201ENST00000390882 105 ntBASIC-1.69□□□□□ -2.68
CFAP54Q96N23 RNU6-765P-201ENST00000516916 99 ntBASIC-1.69□□□□□ -2.68
CFAP54Q96N23 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.69□□□□□ -2.68
CFAP54Q96N23 MIR10A-201ENST00000385043 110 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.7□□□□□ -2.68
CFAP54Q96N23 AC016632.1-201ENST00000503994 196 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1.7□□□□□ -2.68
CFAP54Q96N23 AC018714.1-201ENST00000605028 208 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 MIR487B-201ENST00000385021 84 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.7□□□□□ -2.68
CFAP54Q96N23 USP9YP28-201ENST00000435142 589 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.7□□□□□ -2.68
CFAP54Q96N23 SNORA40.17-201ENST00000517256 115 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 RNU6-142P-201ENST00000384019 107 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 RNU6-754P-201ENST00000391166 107 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 AC090844.1-201ENST00000422019 156 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 SNORD39.3-201ENST00000584451 71 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
CFAP54Q96N23 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.7□□□□□ -2.68
CFAP54Q96N23 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 MIR513C-201ENST00000401352 84 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 AL358934.1-201ENST00000432346 324 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 POLR3GP1-201ENST00000594073 261 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 SNORD115-40-201ENST00000606510 82 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.71□□□□□ -2.68
CFAP54Q96N23 SNORD115-26-201ENST00000365067 82 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 RNU2-9P-201ENST00000410194 145 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 MTND1P27-201ENST00000451117 902 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 RNA5SP20-201ENST00000515976 84 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 MIR4473-201ENST00000583731 91 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 Z97988.1-201ENST00000637697 135 ntBASIC-1.71□□□□□ -2.68
CFAP54Q96N23 RNU6-973P-201ENST00000364690 107 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 MIR1253-201ENST00000408273 105 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 MTND1P26-201ENST00000440488 538 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 snoU13.2-201ENST00000459201 104 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 RNU6-175P-201ENST00000516896 107 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-1.72□□□□□ -2.68
CFAP54Q96N23 U6.114-201ENST00000636407 96 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 RNU6-873P-201ENST00000363833 107 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 RNU1-141P-201ENST00000364623 158 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 AL355375.2-201ENST00000574825 175 ntBASIC-1.72□□□□□ -2.68
CFAP54Q96N23 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.72□□□□□ -2.69
CFAP54Q96N23 MTND1P11-201ENST00000456661 876 ntBASIC-1.72□□□□□ -2.69
CFAP54Q96N23 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.72□□□□□ -2.69
CFAP54Q96N23 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.72□□□□□ -2.69
CFAP54Q96N23 AL158211.4-201ENST00000606988 584 ntBASIC-1.72□□□□□ -2.69
CFAP54Q96N23 RNU6-128P-201ENST00000383976 107 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 MIR452-201ENST00000385020 85 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 FABP5P15-201ENST00000453566 214 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 U8.19-201ENST00000459095 133 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 AC099654.9-201ENST00000637055 678 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 MIRLET7C-201ENST00000362160 84 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 MTCYBP8-201ENST00000422855 651 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.73□□□□□ -2.69
CFAP54Q96N23 AC087894.1-201ENST00000538359 518 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 AC103996.1-201ENST00000555468 102 ntBASIC-1.73□□□□□ -2.69
CFAP54Q96N23 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AL078595.1-201ENST00000404458 226 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 MIR1283-1-201ENST00000408494 87 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AC074290.1-201ENST00000448883 135 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 SNORA31.19-201ENST00000517079 126 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AC009902.1-201ENST00000519351 183 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AL353572.1-201ENST00000442490 417 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 ZNF114P1-201ENST00000453500 292 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 RNU7-128P-201ENST00000517247 62 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 MIR4753-201ENST00000585119 83 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 AC010608.3-201ENST00000625048 527 ntBASIC-1.74□□□□□ -2.69
CFAP54Q96N23 SNORA1B-201ENST00000362535 133 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD38B-201ENST00000384690 67 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 AL122001.1-201ENST00000457027 370 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 AC091951.3-201ENST00000504093 246 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 AC023538.1-201ENST00000534576 736 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 MIR548AM-201ENST00000584298 74 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 MIR6082-201ENST00000613604 109 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 MIR6740-201ENST00000618268 113 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 AC138649.3-201ENST00000622154 254 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD115-12-201ENST00000362583 82 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD115-9-201ENST00000362912 82 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD115-19-201ENST00000363098 82 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD115-18-201ENST00000363293 82 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 RNU6-179P-201ENST00000363350 107 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 RNU4-92P-201ENST00000363783 136 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD115-17-201ENST00000364612 82 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 SNORD115-20-201ENST00000365099 82 ntBASIC-1.75□□□□□ -2.69
CFAP54Q96N23 RNU7-28P-201ENST00000516759 62 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms