Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-823P-201ENST00000391042 103 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 PGBD4P5-201ENST00000445958 426 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC233266.1-201ENST00000454518 96 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 snoU13.25-201ENST00000458945 104 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 RPS23P4-201ENST00000487908 423 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 RNU6-917P-201ENST00000516294 104 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LINC00477Q96M19 CYP3A52P-201ENST00000563326 91 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 MIR4421-201ENST00000578133 69 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC242852.1-201ENST00000612151 96 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC010205.1-201ENST00000616668 449 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC073349.3-201ENST00000617616 186 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC012676.2-201ENST00000619258 186 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC244015.1-201ENST00000622301 99 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 AC006435.5-201ENST00000624486 112 ntBASIC0.89□□□□□ -2.27
LINC00477Q96M19 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.88□□□□□ -2.27
LINC00477Q96M19 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
LINC00477Q96M19 Y_RNA.39-201ENST00000362620 98 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 RNU6-324P-201ENST00000363957 106 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 Y_RNA.471-201ENST00000384312 102 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 RNU6-424P-201ENST00000384367 105 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 MIR215-201ENST00000384858 110 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 SNORD41-201ENST00000386967 70 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 MIR1302-11-201ENST00000408051 138 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 MIR1302-9-201ENST00000408365 138 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 MIR1302-10-201ENST00000408734 138 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AL591704.2-201ENST00000421658 181 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 SNRPGP10-201ENST00000432323 225 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AL162725.1-201ENST00000435405 301 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AC009474.2-201ENST00000451383 136 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC00477Q96M19 AC093852.1-201ENST00000503587 266 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 SNORA40.14-201ENST00000516543 86 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 Y_RNA.711-201ENST00000516993 102 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 MIR1302-2-201ENST00000607096 138 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AL157834.3-201ENST00000615543 103 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 AL353997.5-201ENST00000618886 171 ntBASIC0.88□□□□□ -2.27
LINC00477Q96M19 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC00477Q96M19 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
LINC00477Q96M19 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 Y_RNA.331-201ENST00000365267 102 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 Y_RNA.418-201ENST00000384029 102 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 RNU6-1065P-201ENST00000384513 106 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 Y_RNA.527-201ENST00000384573 102 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 PIGPP3-201ENST00000425307 415 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AC108667.1-201ENST00000428618 249 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC00477Q96M19 MTCYBP6-201ENST00000441810 138 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AC069257.2-201ENST00000441819 155 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC00477Q96M19 RPS20P10-201ENST00000451209 253 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 HSPE1P25-201ENST00000455484 251 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 MTND5P22-201ENST00000458380 195 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 U8.20-201ENST00000459445 131 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AL133373.1-201ENST00000497098 94 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 RNU6-922P-201ENST00000516753 99 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 RNU6-341P-201ENST00000516973 96 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 RNU6-897P-201ENST00000517135 105 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AL512310.8-201ENST00000550183 120 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AC015712.3-201ENST00000559380 164 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.87□□□□□ -2.27
LINC00477Q96M19 MIR3171-201ENST00000584270 74 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AL591926.4-201ENST00000616895 298 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC00477Q96M19 AC090971.5-201ENST00000621102 293 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 AL008636.1-201ENST00000625038 1018 ntBASIC0.87□□□□□ -2.27
LINC00477Q96M19 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
LINC00477Q96M19 RNA5SP327-201ENST00000362494 101 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 Y_RNA.28-201ENST00000362554 111 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 RNU4-80P-201ENST00000363200 141 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 Y_RNA.153-201ENST00000363615 91 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 SNORA7.1-201ENST00000363750 139 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 Y_RNA.310-201ENST00000365063 113 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 Y_RNA.551-201ENST00000384661 102 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 MIR660-201ENST00000385235 97 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 MIR1285-1-201ENST00000408593 84 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 MIR1278-201ENST00000408753 81 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 RPL21P38-201ENST00000418090 167 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 ELOCP20-201ENST00000422460 345 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.86□□□□□ -2.27
LINC00477Q96M19 RNU7-95P-201ENST00000459222 64 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 Y_RNA.631-201ENST00000459607 101 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 MIR4300-201ENST00000581016 96 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 AL121655.1-201ENST00000605811 308 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 AC040896.1-201ENST00000613819 479 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 AC068647.2-201ENST00000637380 353 ntBASIC0.86□□□□□ -2.27
LINC00477Q96M19 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
LINC00477Q96M19 snoU2_19.2-201ENST00000363024 80 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 Y_RNA.363-201ENST00000365529 113 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 SNORD14.1-201ENST00000365609 90 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 RNU6-1310P-201ENST00000384153 107 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 RN7SKP200-201ENST00000410564 320 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 MTCO2P12-201ENST00000427426 682 ntBASIC0.85□□□□□ -2.27
LINC00477Q96M19 AL163540.1-201ENST00000485382 386 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms