Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR4697-201ENST00000582977 78 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 AC005000.2-201ENST00000605468 310 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 AC006441.5-201ENST00000612680 209 ntBASIC3.29□□□□□ -1.88
CALR3Q96L12 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.28□□□□□ -1.88
CALR3Q96L12 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.28□□□□□ -1.88
CALR3Q96L12 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CALR3Q96L12 Y_RNA.52-201ENST00000362760 96 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 SNORA7.4-201ENST00000384249 137 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 RNU6-950P-201ENST00000384651 107 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 MIR891A-201ENST00000401237 79 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 RNA5SP270-201ENST00000411361 118 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.28□□□□□ -1.88
CALR3Q96L12 RN7SL633P-201ENST00000488974 297 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 RN7SKP179-201ENST00000516126 217 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 AC090049.2-201ENST00000550377 109 ntBASIC3.28□□□□□ -1.88
CALR3Q96L12 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CALR3Q96L12 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CALR3Q96L12 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CALR3Q96L12 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CALR3Q96L12 SNORA63D-201ENST00000364359 132 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 Y_RNA.336-201ENST00000365307 109 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 MIR548A2-201ENST00000384956 97 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CALR3Q96L12 RN7SKP200-201ENST00000410564 320 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.27□□□□□ -1.89
CALR3Q96L12 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.27□□□□□ -1.89
CALR3Q96L12 RNVU1-2-201ENST00000516326 135 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 RNU6-659P-201ENST00000516454 104 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 SNORA31.10-201ENST00000516482 106 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CALR3Q96L12 AC006023.1-201ENST00000603944 259 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CALR3Q96L12 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CALR3Q96L12 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.27□□□□□ -1.89
CALR3Q96L12 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CALR3Q96L12 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CALR3Q96L12 AL136360.1-201ENST00000503377 1900 ntBASIC3.27□□□□□ -1.89
CALR3Q96L12 Y_RNA.294-201ENST00000364916 102 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 SNORA80E-201ENST00000384744 137 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 MIR554-201ENST00000384874 96 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 MIR518F-201ENST00000384973 87 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 SNORA48.1-201ENST00000390879 135 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 MIR1193-201ENST00000408109 78 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 HMGN2P32-201ENST00000444648 269 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.26□□□□□ -1.89
CALR3Q96L12 Y_RNA.690-201ENST00000516603 95 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 RNU2-60P-201ENST00000517290 128 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 MIR3121-201ENST00000579680 77 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 AC039056.2-201ENST00000622261 511 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 AC012442.3-202ENST00000636742 206 ntBASIC3.26□□□□□ -1.89
CALR3Q96L12 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CALR3Q96L12 MIR548O-201ENST00000408583 114 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 Y_RNA.625-201ENST00000411256 107 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.25□□□□□ -1.89
CALR3Q96L12 MTATP6P21-201ENST00000440681 189 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 RN7SL20P-201ENST00000488827 297 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.25□□□□□ -1.89
CALR3Q96L12 YPEL5P2-201ENST00000605553 359 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 SNORD14A-201ENST00000606526 91 ntBASIC3.25□□□□□ -1.89
CALR3Q96L12 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CALR3Q96L12 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CALR3Q96L12 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CALR3Q96L12 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CALR3Q96L12 AC009487.2-201ENST00000420969 6821 ntBASIC3.24□□□□□ -1.89
CALR3Q96L12 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CALR3Q96L12 RNU6-268P-201ENST00000364174 107 ntBASIC3.24□□□□□ -1.89
CALR3Q96L12 Y_RNA.273-201ENST00000364703 102 ntBASIC3.24□□□□□ -1.89
CALR3Q96L12 MTATP6P29-201ENST00000415057 132 ntBASIC3.24□□□□□ -1.89
CALR3Q96L12 SNRPGP14-201ENST00000435400 219 ntBASIC3.24□□□□□ -1.89
CALR3Q96L12 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CALR3Q96L12 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
CALR3Q96L12 SNORD77.3-201ENST00000391113 65 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 AL034345.1-201ENST00000407768 123 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 AL158823.1-201ENST00000418441 478 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 AF228730.3-201ENST00000436691 102 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 RNU7-107P-201ENST00000459121 61 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 CYCTP-201ENST00000504253 315 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.23□□□□□ -1.89
CALR3Q96L12 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 AC134878.1-201ENST00000619901 243 ntBASIC3.23□□□□□ -1.89
CALR3Q96L12 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CALR3Q96L12 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CALR3Q96L12 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.22□□□□□ -1.89
CALR3Q96L12 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
CALR3Q96L12 RNU6-235P-201ENST00000362644 107 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 VTRNA1-1-201ENST00000363120 99 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 Y_RNA.114-201ENST00000363265 113 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 Y_RNA.280-201ENST00000364765 112 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 MIR520A-201ENST00000384862 85 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 RNA5SP501-201ENST00000410990 112 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.22□□□□□ -1.89
CALR3Q96L12 HSPE1P9-201ENST00000440046 311 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 AL158147.1-201ENST00000443970 75 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 RPL21P10-201ENST00000463521 490 ntBASIC3.22□□□□□ -1.89
CALR3Q96L12 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CALR3Q96L12 AC114811.1-201ENST00000507207 168 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms