Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MIR4676-201ENST00000583078 72 ntBASIC-0.91□□□□□ -2.56
SPG11Q96JI7 AP000942.4-201ENST00000604811 241 ntBASIC-0.91□□□□□ -2.56
SPG11Q96JI7 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.91□□□□□ -2.56
SPG11Q96JI7 AC010975.3-201ENST00000618727 978 ntBASIC-0.91□□□□□ -2.56
SPG11Q96JI7 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 SNORD116-23-201ENST00000384645 92 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
SPG11Q96JI7 SNORA26.5-201ENST00000391215 123 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 AC243428.1-201ENST00000421099 264 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.92□□□□□ -2.56
SPG11Q96JI7 MTATP6P26-201ENST00000445926 662 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 USP9YP12-201ENST00000450481 570 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 RNU7-136P-201ENST00000458819 69 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.92□□□□□ -2.56
SPG11Q96JI7 MTND1P8-201ENST00000571424 950 ntBASIC-0.92□□□□□ -2.56
SPG11Q96JI7 RNU6-216P-201ENST00000363282 104 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU4-28P-201ENST00000364739 141 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU6-946P-201ENST00000383878 107 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 SNORA1-201ENST00000384107 130 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 MIR136-201ENST00000385207 82 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU2-8P-201ENST00000410727 190 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 SNRPGP10-201ENST00000432323 225 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AL358944.1-201ENST00000528537 144 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AP001330.5-201ENST00000607176 411 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AL445523.1-201ENST00000451184 1362 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
SPG11Q96JI7 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU6-228P-201ENST00000362700 106 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU6-509P-201ENST00000363519 107 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 MTCO1P17-201ENST00000411522 491 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AC016907.1-201ENST00000419483 435 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.93□□□□□ -2.56
SPG11Q96JI7 FCF1P4-201ENST00000448326 183 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AC022447.4-201ENST00000504053 364 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU6-377P-201ENST00000515965 102 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AL442663.2-201ENST00000554385 511 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 MIR544B-201ENST00000582372 78 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 AF250324.2-201ENST00000608299 610 ntBASIC-0.93□□□□□ -2.56
SPG11Q96JI7 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 RNU6-702P-201ENST00000364982 107 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 SNORA22B-201ENST00000383876 138 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 MIR588-201ENST00000384900 83 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 MIR181B2-201ENST00000385004 89 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 MIR518B-201ENST00000385127 83 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 MIR16-1-201ENST00000385271 89 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 SSR1P2-201ENST00000415208 787 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AL512286.1-201ENST00000439244 400 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 EPS15P1-201ENST00000448836 336 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC104563.1-201ENST00000476147 376 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC022784.5-201ENST00000522241 437 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.94□□□□□ -2.56
SPG11Q96JI7 MIR4791-201ENST00000607666 84 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.94□□□□□ -2.56
SPG11Q96JI7 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 RNU6-819P-201ENST00000364116 107 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 SNORD38C-201ENST00000384381 69 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 MIR578-201ENST00000384828 96 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC078809.1-201ENST00000427601 140 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 RNU6-221P-201ENST00000459541 99 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC131281.1-201ENST00000522984 164 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AC021451.1-201ENST00000523498 1129 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 AL356055.1-201ENST00000602528 446 ntBASIC-0.94□□□□□ -2.56
SPG11Q96JI7 RNU6-527P-201ENST00000363425 104 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 U8.17-201ENST00000391292 132 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 RNA5SP475-201ENST00000410568 110 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.95□□□□□ -2.56
SPG11Q96JI7 RPL39P36-201ENST00000490784 156 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 RNU7-28P-201ENST00000516759 62 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.95□□□□□ -2.56
SPG11Q96JI7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.95□□□□□ -2.56
SPG11Q96JI7 YWHAEP3-201ENST00000582767 121 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 AC022893.3-201ENST00000607665 437 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 AC253576.2-201ENST00000618815 580 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 RPS29P13-201ENST00000402041 169 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 CALM2P2-201ENST00000428512 440 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 MIR3139-201ENST00000579145 76 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 POLR3GP1-201ENST00000594073 261 ntBASIC-0.95□□□□□ -2.56
SPG11Q96JI7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.96□□□□□ -2.56
SPG11Q96JI7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.96□□□□□ -2.56
SPG11Q96JI7 MTATP6P14-201ENST00000455189 673 ntBASIC-0.96□□□□□ -2.56
SPG11Q96JI7 SUMO2P5-201ENST00000506790 245 ntBASIC-0.96□□□□□ -2.56
SPG11Q96JI7 MTND5P42-201ENST00000637720 498 ntBASIC-0.96□□□□□ -2.56
SPG11Q96JI7 AC132825.6-201ENST00000638861 357 ntBASIC-0.96□□□□□ -2.56
SPG11Q96JI7 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.96□□□□□ -2.56
SPG11Q96JI7 RNU6-312P-201ENST00000364629 107 ntBASIC-0.96□□□□□ -2.56
SPG11Q96JI7 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms