Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 RPS4XP11-201ENST00000446897 772 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-1096P-201ENST00000517089 102 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-111P-201ENST00000517179 105 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 SUB1P4-201ENST00000566062 339 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 AL008718.3-201ENST00000610217 321 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 MIR6079-201ENST00000635807 62 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.25□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.76-201ENST00000362931 109 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.82-201ENST00000363000 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.92-201ENST00000363043 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.122-201ENST00000363331 96 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.235-201ENST00000364412 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.306-201ENST00000365015 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.312-201ENST00000365089 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.322-201ENST00000365151 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-211P-201ENST00000384047 107 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AL445646.1-201ENST00000431784 216 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AC233266.1-201ENST00000454518 96 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.650-201ENST00000459002 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 RNU7-115P-201ENST00000516433 55 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.777-201ENST00000516982 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-388P-201ENST00000517012 105 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-389P-201ENST00000517048 105 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AC024405.2-202ENST00000532731 184 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 MIR4648-201ENST00000580107 72 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 POLR3GP1-201ENST00000594073 261 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.771-201ENST00000598668 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AC242852.1-201ENST00000612151 96 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 MIR548AY-201ENST00000617669 107 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 AC244015.1-201ENST00000622301 99 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.789-201ENST00000622480 102 ntBASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
CDK5RAP3Q96JB5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-899P-201ENST00000363947 107 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 Y_RNA.269-201ENST00000364685 89 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-1323P-201ENST00000384025 107 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 MIR520G-201ENST00000385064 90 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 RNA5SP109-201ENST00000391010 116 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 AC069257.2-201ENST00000441819 155 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 AL606517.2-201ENST00000442855 241 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 RNU7-94P-201ENST00000459576 63 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 MIR4448-201ENST00000584360 86 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 AC091178.2-201ENST00000584401 117 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 AC005357.1-201ENST00000588399 301 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 AC013791.1-201ENST00000616619 62 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.23□□□□□ -2.05
CDK5RAP3Q96JB5 SNORA70B-201ENST00000384210 135 ntBASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 RNU2-7P-201ENST00000410794 178 ntBASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 SNORD2.1-201ENST00000458762 69 ntBASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 RNU7-116P-201ENST00000516940 62 ntBASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 AC022217.4-201ENST00000604389 163 ntBASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 AP003357.1-201ENST00000604497 148 ntBASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.22□□□□□ -2.05
CDK5RAP3Q96JB5 RNU6-112P-201ENST00000363599 104 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP126-201ENST00000365092 109 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 MIR520A-201ENST00000384862 85 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 Y_RNA.638-201ENST00000459374 113 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 RPL23AP54-201ENST00000495129 419 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 SNORD116-28-201ENST00000516123 91 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 RNU6-341P-201ENST00000516973 96 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 AC011604.1-201ENST00000545978 196 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 AC127455.1-201ENST00000565496 145 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 MIR5692C2-201ENST00000577959 77 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 MIR5089-201ENST00000580047 84 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 MIR3671-201ENST00000580455 88 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 MIR4282-201ENST00000583613 67 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 AC078938.1-201ENST00000620993 318 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDK5RAP3Q96JB5 RNU6-1205P-201ENST00000363625 106 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 Y_RNA.293-201ENST00000364908 93 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 SNORA72-201ENST00000384339 132 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 SNORD58.1-201ENST00000391313 66 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 SNORA36B-201ENST00000410438 131 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 AC245047.3-201ENST00000429428 127 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 RPS27P1-201ENST00000450552 247 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 RNU4-71P-201ENST00000516258 113 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 MIR4713-201ENST00000582691 75 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 AL442067.1-201ENST00000613261 223 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 AC073349.3-201ENST00000617616 186 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
CDK5RAP3Q96JB5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms