Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 AL049779.4-201ENST00000604500 156 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 MIR3199-2-201ENST00000636243 86 ntBASIC2.67□□□□□ -1.98
CHFRQ96EP1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.67□□□□□ -1.98
CHFRQ96EP1 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHFRQ96EP1 SNORD114-19-201ENST00000363072 75 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 U3.8-201ENST00000363675 217 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 Y_RNA.587-201ENST00000391210 103 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 RNU6-762P-201ENST00000517107 102 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.66□□□□□ -1.98
CHFRQ96EP1 MIR3605-201ENST00000583214 100 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 AC131055.1-201ENST00000584626 316 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 AP003357.1-201ENST00000604497 148 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 AL021707.8-201ENST00000609428 183 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 AC106754.2-201ENST00000623006 233 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 MIR203B-201ENST00000636080 86 ntBASIC2.66□□□□□ -1.98
CHFRQ96EP1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHFRQ96EP1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CHFRQ96EP1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
CHFRQ96EP1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CHFRQ96EP1 AL603914.1-201ENST00000401964 204 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 AL133475.1-201ENST00000404414 305 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 RN7SKP101-201ENST00000411376 320 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 Y_RNA.690-201ENST00000516603 95 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 RNU2-44P-201ENST00000516795 194 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 IGKV1-22-201ENST00000524313 326 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 CTSLP2-204ENST00000629029 392 ntBASIC2.65□□□□□ -1.99
CHFRQ96EP1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHFRQ96EP1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CHFRQ96EP1 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 ZNF658B-202ENST00000615961 3375 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 RNU6-647P-201ENST00000364243 107 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 RNU6-294P-201ENST00000364999 102 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 RNU6-49P-201ENST00000384256 107 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 AL355796.1-201ENST00000406706 323 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.64□□□□□ -1.99
CHFRQ96EP1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.64□□□□□ -1.99
CHFRQ96EP1 AC090515.1-201ENST00000465295 476 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 SNORA70.12-201ENST00000516084 153 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 RNU6-1337P-201ENST00000516525 95 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 SNORD19.2-201ENST00000516978 73 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 MIR3199-1-201ENST00000582434 88 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 AC025166.1-201ENST00000612411 163 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 MIR7157-201ENST00000635801 60 ntBASIC2.64□□□□□ -1.99
CHFRQ96EP1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHFRQ96EP1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CHFRQ96EP1 MTND5P18-201ENST00000445624 1801 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.63□□□□□ -1.99
CHFRQ96EP1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHFRQ96EP1 MAPK10-266ENST00000641066 6555 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CHFRQ96EP1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHFRQ96EP1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHFRQ96EP1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CHFRQ96EP1 SNORD114-30-201ENST00000364448 72 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 RNU6-1323P-201ENST00000384025 107 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 SNORA72-201ENST00000384339 132 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 MIR27B-201ENST00000385129 97 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 SNORA26.2-201ENST00000390922 122 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 SNORA79-201ENST00000408376 140 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 AL135786.1-201ENST00000415892 214 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.63□□□□□ -1.99
CHFRQ96EP1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.63□□□□□ -1.99
CHFRQ96EP1 RPL23AP7-203ENST00000449021 469 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.63□□□□□ -1.99
CHFRQ96EP1 AC018630.3-201ENST00000542637 96 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 AL160236.1-201ENST00000556317 195 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 AC010297.1-201ENST00000623948 149 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 AL596211.1-201ENST00000569873 2277 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
CHFRQ96EP1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.62□□□□□ -1.99
CHFRQ96EP1 AC010889.1-201ENST00000566193 2666 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 Y_RNA.281-201ENST00000364774 94 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 RNU6-1131P-201ENST00000364955 107 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 Y_RNA.346-201ENST00000365385 112 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 RNU1-52P-201ENST00000384190 164 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 RNU6-136P-201ENST00000384663 107 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.62□□□□□ -1.99
CHFRQ96EP1 AC011753.1-201ENST00000451001 220 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 snoU13.14-201ENST00000459372 104 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 RNU6-437P-201ENST00000459408 95 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 RN7SL297P-201ENST00000483161 293 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 AC145146.1-201ENST00000496370 254 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 MIR4446-201ENST00000578505 67 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 POLR3GP1-201ENST00000594073 261 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 AP001318.4-201ENST00000616637 121 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
CHFRQ96EP1 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
CHFRQ96EP1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CHFRQ96EP1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CHFRQ96EP1 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 SNORD114-7-201ENST00000362520 77 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 Y_RNA.91-201ENST00000363042 107 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 U8.2-201ENST00000363156 134 ntBASIC2.61□□□□□ -1.99
CHFRQ96EP1 RNU6-674P-201ENST00000363831 107 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 277 ms