Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 SNORD115-30-201ENST00000364117 82 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 RNU6-879P-201ENST00000364328 108 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 RNU4-24P-201ENST00000364565 139 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 RNU4-75P-201ENST00000364621 146 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.554-201ENST00000384672 102 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 MIR216A-201ENST00000385063 110 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 MIR4790-201ENST00000577799 79 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 AC100810.6-201ENST00000638068 285 ntBASIC0.51□□□□□ -2.33
ECHDC3Q96DC8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 SNORD68-201ENST00000363214 84 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.112-201ENST00000363250 102 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 SNORD18A-201ENST00000363753 72 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 RNU6-593P-201ENST00000364716 112 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1310P-201ENST00000384153 107 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.450-201ENST00000384198 113 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 AC074085.1-201ENST00000413598 418 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 AL139396.1-201ENST00000421137 167 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1016P-201ENST00000516689 94 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 AC023827.1-201ENST00000569247 97 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 AC048344.4-201ENST00000619744 527 ntBASIC0.5□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.466-201ENST00000384294 113 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.473-201ENST00000384333 102 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RNU6-342P-201ENST00000384521 104 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 MIR520C-201ENST00000385005 87 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 SNORD89-201ENST00000390981 114 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.594-201ENST00000410373 140 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 AL392103.1-201ENST00000447000 198 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RPS20P10-201ENST00000451209 253 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RNU7-87P-201ENST00000459343 62 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 SNORA25.10-201ENST00000515926 124 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RNU4-49P-201ENST00000516080 140 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.670-201ENST00000516255 105 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1337P-201ENST00000516525 95 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RNU11-2P-201ENST00000516898 142 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 AC036111.3-201ENST00000526389 112 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 MIR4764-201ENST00000580680 88 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 AC015540.1-201ENST00000615828 501 ntBASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.49□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1301P-201ENST00000362724 104 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 SNORA25.3-201ENST00000363205 127 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MIR522-201ENST00000385071 87 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MIR136-201ENST00000385207 82 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MIR936-201ENST00000401264 98 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MIR548K-201ENST00000408406 116 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MIR1302-7-201ENST00000408841 72 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1050P-201ENST00000410388 107 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MTND2P22-201ENST00000444325 1033 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 Z83846.1-201ENST00000446798 265 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 RNU6-329P-201ENST00000459618 107 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.682-201ENST00000516457 100 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 RNU7-43P-201ENST00000516554 64 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 RNA5SP480-201ENST00000516840 109 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 AC009229.3-201ENST00000608056 282 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.48□□□□□ -2.33
ECHDC3Q96DC8 RNA5SP48-201ENST00000363969 126 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 RNU6-1297P-201ENST00000384415 104 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 MIR516B2-201ENST00000385190 85 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 AC018638.8-201ENST00000588755 281 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 AC011712.1-201ENST00000588959 234 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
ECHDC3Q96DC8 Y_RNA.253-201ENST00000364562 112 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.295-201ENST00000364918 102 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 RNY1P4-201ENST00000384595 115 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 MIR15B-201ENST00000385045 98 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 SNORD111-201ENST00000408139 94 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 SNORD12B-201ENST00000410433 91 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 AC244098.3-201ENST00000424803 96 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 RNU6-496P-201ENST00000516145 99 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 MIR2355-201ENST00000517199 87 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 AC055872.1-201ENST00000570978 278 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 EIF1P4-201ENST00000572664 335 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 RN7SL793P-201ENST00000583259 296 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 AC007742.2-201ENST00000618226 398 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 7SK.10-201ENST00000621414 298 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.2-201ENST00000362330 96 ntBASIC0.45□□□□□ -2.34
ECHDC3Q96DC8 Y_RNA.339-201ENST00000365325 102 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms