Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 AC005176.2-201ENST00000596933 147 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 AP000942.3-201ENST00000603702 160 ntBASIC0.71□□□□□ -2.3
UFD1Q92890 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
UFD1Q92890 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 Y_RNA.172-201ENST00000363765 102 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 MIR608-201ENST00000384820 100 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 MIR516B2-201ENST00000385190 85 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 SNORD78.2-201ENST00000391076 69 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 RNU6-192P-201ENST00000391253 100 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.7□□□□□ -2.3
UFD1Q92890 CHEK2P4-201ENST00000450340 246 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 SNORA25.10-201ENST00000515926 124 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 RNA5SP255-201ENST00000516370 107 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.7□□□□□ -2.3
UFD1Q92890 MIR5690-201ENST00000583739 73 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 MIR4298-201ENST00000584380 73 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 MIR4781-201ENST00000585250 76 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
UFD1Q92890 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
UFD1Q92890 RNU6-324P-201ENST00000363957 106 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 SNORD81.2-201ENST00000365153 76 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 AC117470.1-201ENST00000381974 330 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU6-20P-201ENST00000384106 107 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU6-890P-201ENST00000384121 107 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 MIR522-201ENST00000385071 87 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU6-1199P-201ENST00000411249 104 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RPL30P15-201ENST00000457129 321 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU7-169P-201ENST00000459456 61 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 PRDX4P1-201ENST00000507189 574 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU6-155P-201ENST00000516347 100 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU6-1012P-201ENST00000516606 109 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 SNORA74.3-201ENST00000517108 154 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 AC139792.2-201ENST00000624218 587 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
UFD1Q92890 RNU6-626P-201ENST00000363354 107 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 RNY3P11-201ENST00000364153 102 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 Y_RNA.327-201ENST00000365201 102 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 Y_RNA.446-201ENST00000384178 104 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 MIR520C-201ENST00000385005 87 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 MIR136-201ENST00000385207 82 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 MT-TL1-201ENST00000386347 75 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 RNU6-876P-201ENST00000391295 104 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 FABP5P4-201ENST00000437203 171 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.68□□□□□ -2.3
UFD1Q92890 AC005840.1-201ENST00000498412 377 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 RNU6-470P-201ENST00000515954 104 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 RNU6-436P-201ENST00000516171 114 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 MTND4LP26-201ENST00000518144 282 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 AP003716.2-201ENST00000528260 108 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.68□□□□□ -2.3
UFD1Q92890 AC005972.2-201ENST00000604690 348 ntBASIC0.68□□□□□ -2.3
UFD1Q92890 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 MIR15B-201ENST00000385045 98 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 Y_RNA.605-201ENST00000410577 105 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 RNU6-1304P-201ENST00000411374 106 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 MLLT10P1-201ENST00000418346 262 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 RNU7-41P-201ENST00000515917 61 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 RNU6-966P-201ENST00000516479 104 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 SNORD45.4-201ENST00000516629 73 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 MIR6857-201ENST00000613267 93 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 AC011476.5-201ENST00000615594 130 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 U6atac.1-201ENST00000616025 117 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 AC022306.2-201ENST00000617563 647 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 U2.1-201ENST00000618978 145 ntBASIC0.67□□□□□ -2.3
UFD1Q92890 RNU6-1084P-201ENST00000362498 107 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 Y_RNA.248-201ENST00000364501 109 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 SNORD14.1-201ENST00000365609 90 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 SNORA72-201ENST00000384339 132 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MIR1185-1-201ENST00000408598 86 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 Y_RNA.599-201ENST00000410489 109 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 AC092473.1-201ENST00000441098 221 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MTCO3P10-201ENST00000455912 772 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 U8.19-201ENST00000459095 133 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 HMGN1P7-201ENST00000491722 313 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MIR4659A-201ENST00000580269 81 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MIR4764-201ENST00000580680 88 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 MIR4769-201ENST00000584126 77 ntBASIC0.66□□□□□ -2.3
UFD1Q92890 Y_RNA.146-201ENST00000363549 102 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 Y_RNA.230-201ENST00000364348 109 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 snoU2-30.1-201ENST00000365012 70 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 Y_RNA.474-201ENST00000384341 102 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 MIR628-201ENST00000385229 95 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 MTND1P2-201ENST00000430604 821 ntBASIC0.65□□□□□ -2.31
UFD1Q92890 HMGN2P32-201ENST00000444648 269 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 259.9 ms