Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 U2.1-201ENST00000618978 145 ntBASIC0.73□□□□□ -2.29
RTN4IP1Q8WWV3 AC012676.2-201ENST00000619258 186 ntBASIC0.73□□□□□ -2.29
RTN4IP1Q8WWV3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
RTN4IP1Q8WWV3 SNORA72.1-201ENST00000363485 129 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNU1-124P-201ENST00000363861 145 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNU6-1310P-201ENST00000384153 107 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 Y_RNA.446-201ENST00000384178 104 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 MIR520G-201ENST00000385064 90 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNA5SP482-201ENST00000391269 118 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNU2-54P-201ENST00000410299 190 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNU2-61P-201ENST00000411069 191 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 Y_RNA.632-201ENST00000459189 102 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RPS26P48-201ENST00000491713 339 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 SNORD116-28-201ENST00000516123 91 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNU6-155P-201ENST00000516347 100 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 RNU7-4P-201ENST00000516961 62 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 AC136932.1-201ENST00000574771 208 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 AC005176.2-201ENST00000596933 147 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 AC004832.4-201ENST00000608952 331 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
RTN4IP1Q8WWV3 MIR337-201ENST00000362281 93 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.58-201ENST00000362807 102 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD68-201ENST00000363214 84 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.154-201ENST00000363624 102 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD114-27-201ENST00000363766 70 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-324P-201ENST00000363957 106 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNY3P1-201ENST00000365085 102 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 SNORA2.2-201ENST00000365473 135 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNY3-201ENST00000365484 102 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.387-201ENST00000383918 102 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-1040P-201ENST00000383974 107 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.463-201ENST00000384271 102 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.529-201ENST00000384586 119 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 MIR222-201ENST00000384992 110 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD78.2-201ENST00000391076 69 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AL451046.2-201ENST00000403074 277 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AC245047.7-201ENST00000440265 293 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AC093019.1-201ENST00000443135 252 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AC114811.1-201ENST00000507207 168 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-436P-201ENST00000516171 114 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNU7-28P-201ENST00000516759 62 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AC144568.1-201ENST00000520139 137 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AC006600.1-201ENST00000572529 153 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 MIR3192-201ENST00000584920 77 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 FAM106DP-201ENST00000586416 501 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 UBE2V2P2-201ENST00000587677 504 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AC122108.2-201ENST00000611946 526 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 AL391516.1-201ENST00000554380 2449 ntBASIC0.71□□□□□ -2.3
RTN4IP1Q8WWV3 RNU4-79P-201ENST00000362764 141 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-490P-201ENST00000362985 107 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.80-201ENST00000362996 102 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.485-201ENST00000384395 102 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-163P-201ENST00000384396 106 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD124-201ENST00000459577 104 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 AC010655.3-201ENST00000478818 450 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.661-201ENST00000516003 99 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-113P-201ENST00000516653 101 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 SNORA70.22-201ENST00000517160 124 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 AC011604.1-201ENST00000545978 196 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 AC120024.3-201ENST00000603167 156 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 MIR4272-201ENST00000635924 64 ntBASIC0.7□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD114-7-201ENST00000362520 77 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 MIR516B2-201ENST00000385190 85 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 MIR628-201ENST00000385229 95 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 MTND1P14-201ENST00000427400 950 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 AC002429.1-201ENST00000437672 148 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-875P-201ENST00000516488 106 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 AL358944.1-201ENST00000528537 144 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 AL020996.3-201ENST00000606617 222 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 AC112487.2-201ENST00000637950 304 ntBASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
RTN4IP1Q8WWV3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNORD81.1-201ENST00000363064 77 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-833P-201ENST00000363486 107 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 Y_RNA.253-201ENST00000364562 112 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 RNU6-969P-201ENST00000383900 105 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 MIR562-201ENST00000384894 95 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNORA75.2-201ENST00000391138 150 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 SNORA75.3-201ENST00000391231 150 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 MIR891A-201ENST00000401237 79 ntBASIC0.68□□□□□ -2.3
RTN4IP1Q8WWV3 AL590004.1-201ENST00000405321 300 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms