Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.25□□□□□ -2.21
LINC01006Q8NI28 AL117187.1-201ENST00000555482 181 ntBASIC1.25□□□□□ -2.21
LINC01006Q8NI28 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
LINC01006Q8NI28 MIR3684-201ENST00000579779 74 ntBASIC1.25□□□□□ -2.21
LINC01006Q8NI28 BX248123.2-201ENST00000606318 124 ntBASIC1.25□□□□□ -2.21
LINC01006Q8NI28 SNORD113-5-201ENST00000607261 78 ntBASIC1.25□□□□□ -2.21
LINC01006Q8NI28 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.25□□□□□ -2.21
LINC01006Q8NI28 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AL391987.6-201ENST00000305671 199 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.84-201ENST00000363011 104 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.152-201ENST00000363578 100 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 RNU6-376P-201ENST00000384731 106 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.574-201ENST00000384766 95 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 RNU6-1105P-201ENST00000384774 107 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 MIR515-2-201ENST00000384883 83 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 MIR515-1-201ENST00000384884 83 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 MIR517C-201ENST00000385103 95 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 RN7SKP101-201ENST00000411376 320 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AC004965.1-201ENST00000413033 213 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AL358176.2-201ENST00000425769 204 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 SUMO1P2-201ENST00000452524 304 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AC091021.1-201ENST00000468051 388 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AC024995.1-201ENST00000523014 93 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AC103810.8-201ENST00000607347 118 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 AC127459.3-201ENST00000624328 466 ntBASIC1.24□□□□□ -2.21
LINC01006Q8NI28 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
LINC01006Q8NI28 WWP1P1-201ENST00000466609 2769 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.327-201ENST00000365201 102 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 RNU6-290P-201ENST00000365212 101 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 MIR520A-201ENST00000384862 85 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
LINC01006Q8NI28 RNU6-855P-201ENST00000410395 104 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 RNA5SP511-201ENST00000410487 115 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.23□□□□□ -2.21
LINC01006Q8NI28 AC010154.1-201ENST00000425857 269 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 SNORA70.12-201ENST00000516084 153 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 RNU6-1045P-201ENST00000516321 107 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 AC015720.1-201ENST00000565251 277 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 AC024614.2-201ENST00000577584 372 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.23□□□□□ -2.21
LINC01006Q8NI28 AC004832.4-201ENST00000608952 331 ntBASIC1.23□□□□□ -2.21
LINC01006Q8NI28 RNU4-90P-201ENST00000362773 141 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 SNORD48-201ENST00000364953 64 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 SNORA25.9-201ENST00000365087 128 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.376-201ENST00000365638 108 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.483-201ENST00000384380 101 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 Y_RNA.569-201ENST00000384749 103 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 RNU6-713P-201ENST00000384761 107 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 MIR568-201ENST00000385036 95 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 MT-TW-201ENST00000387382 68 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 SNORA12.1-201ENST00000390873 148 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 RNU2-7P-201ENST00000410794 178 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 MTCO1P5-201ENST00000433573 344 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC01006Q8NI28 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC01006Q8NI28 SNORA31.10-201ENST00000516482 106 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 RNU6-1291P-201ENST00000516591 104 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 RPL21P9-201ENST00000556149 474 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 MIR3122-201ENST00000577243 73 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.22□□□□□ -2.21
LINC01006Q8NI28 PRR13P7-201ENST00000605538 430 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 MIR6079-201ENST00000635807 62 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
LINC01006Q8NI28 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
LINC01006Q8NI28 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01006Q8NI28 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 SNORD114-7-201ENST00000362520 77 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 Y_RNA.47-201ENST00000362697 108 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 Y_RNA.133-201ENST00000363428 110 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-1048P-201ENST00000364054 107 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 Y_RNA.267-201ENST00000364679 109 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 Y_RNA.396-201ENST00000383949 103 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-472P-201ENST00000384299 107 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-1203P-201ENST00000410703 110 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AC245047.3-201ENST00000429428 127 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RPS4XP11-201ENST00000446897 772 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 HSPE1P13-201ENST00000451143 297 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RPS20P10-201ENST00000451209 253 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-1143P-201ENST00000516125 104 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-1278P-201ENST00000516130 107 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-191P-201ENST00000516295 94 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 SNORA44.1-201ENST00000517031 108 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 RNU6-1096P-201ENST00000517089 102 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 SNORA31.24-201ENST00000517232 57 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AC091178.2-201ENST00000584401 117 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AL929325.1-201ENST00000603096 117 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AP001282.2-201ENST00000616149 309 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 MIR8062-201ENST00000621515 85 ntBASIC1.21□□□□□ -2.22
LINC01006Q8NI28 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
LINC01006Q8NI28 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms