Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 RNU6-1323P-201ENST00000384025 107 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 SNORA3.2-201ENST00000408221 125 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 MTND2P29-201ENST00000438595 412 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 RPS27P1-201ENST00000450552 247 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AC233266.1-201ENST00000454518 96 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 SNORD2.1-201ENST00000458762 69 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 MIR5002-201ENST00000584713 97 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AC011921.3-201ENST00000605540 361 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AC242852.1-201ENST00000612151 96 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AL078604.3-201ENST00000615580 211 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AC013791.1-201ENST00000616619 62 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 MIR548AY-201ENST00000617669 107 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 AC244015.1-201ENST00000622301 99 ntBASIC1.98□□□□□ -2.09
SRFBP1Q8NEF9 RNU6-112P-201ENST00000363599 104 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 RNU4-10P-201ENST00000364383 140 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 RN7SKP223-201ENST00000410582 62 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 MIR5692C2-201ENST00000577959 77 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 AL096840.1-201ENST00000603287 93 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 AP003357.1-201ENST00000604497 148 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 U1.36-201ENST00000620684 176 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SRFBP1Q8NEF9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.09
SRFBP1Q8NEF9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.09
SRFBP1Q8NEF9 RNU6-899P-201ENST00000363947 107 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 SNORA4.2-201ENST00000365313 147 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 RNU6-1080P-201ENST00000383982 107 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 SNORA36B-201ENST00000410438 131 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 RPL23AP54-201ENST00000495129 419 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 RNA5SP437-201ENST00000517249 129 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 AC011604.1-201ENST00000545978 196 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 AL929325.1-201ENST00000603096 117 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 AL442067.1-201ENST00000613261 223 ntBASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SRFBP1Q8NEF9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 RNY4P28-201ENST00000365281 93 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 RPL23AP63-201ENST00000498752 471 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 RNY3P16-201ENST00000516338 101 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 RNU6-341P-201ENST00000516973 96 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 AC127455.1-201ENST00000565496 145 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 AC073349.3-201ENST00000617616 186 ntBASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.95□□□□□ -2.1
SRFBP1Q8NEF9 SNORA1B-201ENST00000362535 133 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 SNORA63D-201ENST00000364359 132 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 SNORA72-201ENST00000384339 132 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 MIR520G-201ENST00000385064 90 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 MIR1278-201ENST00000408753 81 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 AC245047.3-201ENST00000429428 127 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 RNA5SP57-201ENST00000459463 123 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 RNU4-71P-201ENST00000516258 113 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 RNU7-116P-201ENST00000516940 62 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 AC141273.2-201ENST00000618989 130 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 AL365265.1-201ENST00000621045 234 ntBASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SRFBP1Q8NEF9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 AC100821.1-201ENST00000523153 2479 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 MIR520A-201ENST00000384862 85 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 RNU2-7P-201ENST00000410794 178 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 RNU6-383P-201ENST00000410864 94 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 AL445646.1-201ENST00000431784 216 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 SNORA31.10-201ENST00000516482 106 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 SNORA31.17-201ENST00000516953 127 ntBASIC1.93□□□□□ -2.1
SRFBP1Q8NEF9 AC091544.4-201ENST00000555268 342 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms