Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 PRDX4P1-201ENST00000507189 574 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 AC022306.2-201ENST00000617563 647 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 MIR382-201ENST00000637119 76 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 RNU6-462P-201ENST00000362659 105 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 RNU4-28P-201ENST00000364739 141 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 RNU6-431P-201ENST00000383874 107 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 AL031274.1-201ENST00000450334 232 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 AC026741.1-201ENST00000605892 482 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 AC022306.3-201ENST00000619930 550 ntBASIC-1.74□□□□□ -2.69
VPS8Q8N3P4 SNORA63C-201ENST00000364578 129 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 RNU6-119P-201ENST00000364882 107 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 MIR8485-201ENST00000401372 91 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 RNA5SP494-201ENST00000410653 129 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 RNU2-8P-201ENST00000410727 190 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 RNU6-370P-201ENST00000411008 104 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 RPL23AP75-201ENST00000491601 451 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 AC005178.1-201ENST00000508392 440 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 RNA5SP272-201ENST00000516095 111 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 MIR378D2-201ENST00000580636 98 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 AC091948.2-201ENST00000636510 279 ntBASIC-1.75□□□□□ -2.69
VPS8Q8N3P4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 RNU7-73P-201ENST00000458743 63 ntBASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 AC005776.1-201ENST00000603164 290 ntBASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 RNU6-86P-201ENST00000606534 107 ntBASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 SNORD11B-201ENST00000607707 90 ntBASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 AL139418.1-201ENST00000613613 177 ntBASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.76□□□□□ -2.69
VPS8Q8N3P4 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 RNU6-125P-201ENST00000384505 107 ntBASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 RNU2-39P-201ENST00000410604 198 ntBASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 SSR1P2-201ENST00000415208 787 ntBASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 AC010608.3-201ENST00000625048 527 ntBASIC-1.77□□□□□ -2.69
VPS8Q8N3P4 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 RNU6-880P-201ENST00000384526 107 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 MIR876-201ENST00000401147 81 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 USP9YP16-201ENST00000430287 407 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 AC010598.1-201ENST00000510378 103 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 RNU6-983P-201ENST00000516004 103 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 MTND4P33-201ENST00000556706 766 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 AC091965.4-201ENST00000607691 587 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 AC084368.1-201ENST00000620935 65 ntBASIC-1.78□□□□□ -2.69
VPS8Q8N3P4 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 RNU6-827P-201ENST00000365553 106 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 SNORD28-201ENST00000384706 75 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 MIR517B-201ENST00000385102 67 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 SNORD38.3-201ENST00000516599 73 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 MIR4280-201ENST00000582178 76 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 AC087683.1-201ENST00000591187 441 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 MTND5P18-201ENST00000445624 1801 ntBASIC-1.79□□□□□ -2.7
VPS8Q8N3P4 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 RNU6-236P-201ENST00000363886 106 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 AL358934.1-201ENST00000432346 324 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 MTND4LP25-201ENST00000570218 163 ntBASIC-1.8□□□□□ -2.7
VPS8Q8N3P4 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.81□□□□□ -2.7
VPS8Q8N3P4 HIF1AP1-201ENST00000553642 175 ntBASIC-1.81□□□□□ -2.7
VPS8Q8N3P4 AC010332.2-201ENST00000613083 1904 ntBASIC-1.81□□□□□ -2.7
VPS8Q8N3P4 SNORA24.1-201ENST00000384401 135 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 MIR570-201ENST00000384917 97 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 MIR4639-201ENST00000584938 69 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 AC108747.1-201ENST00000609508 535 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 SNORA70.25-201ENST00000612741 95 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 AL445584.3-201ENST00000617173 78 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.82□□□□□ -2.7
VPS8Q8N3P4 SNORD56.2-201ENST00000363242 71 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 SNORD28B-201ENST00000390993 75 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 AL158053.1-201ENST00000441503 453 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 RPL30P15-201ENST00000457129 321 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 MIR3179-1-201ENST00000578940 84 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 MIR3179-2-201ENST00000579107 84 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 MIR3179-3-201ENST00000579566 84 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 RNU6-88P-201ENST00000606801 100 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 AF250324.2-201ENST00000608299 610 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 MIR3179-4-201ENST00000617599 84 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 RNU6-490P-201ENST00000362985 107 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.83□□□□□ -2.7
VPS8Q8N3P4 RNU6-769P-201ENST00000384407 104 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms