Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC022217.4-201ENST00000604389 163 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AC005972.2-201ENST00000604690 348 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AC004832.4-201ENST00000608952 331 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 AL627230.6-201ENST00000611129 280 ntBASIC1.71□□□□□ -2.14
BEST3Q8N1M1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.16-201ENST00000362421 102 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 SNORD116-13-201ENST00000384408 92 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 RNU6-136P-201ENST00000384663 107 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 RNU6-360P-201ENST00000390944 104 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 AC245047.3-201ENST00000429428 127 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.7□□□□□ -2.14
BEST3Q8N1M1 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 AC091021.1-201ENST00000468051 388 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
BEST3Q8N1M1 SERF1AP1-201ENST00000514575 187 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 AC136628.3-201ENST00000521868 290 ntBASIC1.7□□□□□ -2.14
BEST3Q8N1M1 AL391987.6-201ENST00000305671 199 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 MIR335-201ENST00000362173 94 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 RNU1-17P-201ENST00000363022 152 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 MIR568-201ENST00000385036 95 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 MT-TW-201ENST00000387382 68 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 snosnR66.1-201ENST00000391095 99 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 AL606517.2-201ENST00000442855 241 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 MRPS17P9-201ENST00000511924 393 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 DEFB108E-201ENST00000524692 240 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 AL358944.1-201ENST00000528537 144 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 AP001282.2-201ENST00000616149 309 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 AC084768.2-201ENST00000622736 221 ntBASIC1.69□□□□□ -2.14
BEST3Q8N1M1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
BEST3Q8N1M1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
BEST3Q8N1M1 RNU6-1323P-201ENST00000384025 107 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 RNU6-472P-201ENST00000384299 107 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.483-201ENST00000384380 101 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 COX6CP10-201ENST00000416832 224 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 FTH1P12-201ENST00000432137 551 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 RPS29P11-201ENST00000496507 171 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.68□□□□□ -2.14
BEST3Q8N1M1 MIR8054-201ENST00000620877 86 ntBASIC1.68□□□□□ -2.14
BEST3Q8N1M1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.68□□□□□ -2.14
BEST3Q8N1M1 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.237-201ENST00000364439 102 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.396-201ENST00000383949 103 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 RNU6-196P-201ENST00000384315 107 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 RNU6-440P-201ENST00000390882 105 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 RN7SKP200-201ENST00000410564 320 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 HMGN2P19-201ENST00000425149 265 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AL135790.2-201ENST00000437701 267 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 HSPE1P21-201ENST00000438283 308 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 RPS4XP11-201ENST00000446897 772 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 snoU13.27-201ENST00000459278 104 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AC091959.1-201ENST00000495857 238 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AC107393.1-201ENST00000512403 346 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 SNORA27.4-201ENST00000516650 95 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 RNU7-116P-201ENST00000516940 62 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AP002004.2-201ENST00000531656 154 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 MIR3122-201ENST00000577243 73 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AL162424.1-201ENST00000602325 221 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AL096840.1-201ENST00000603287 93 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AC068647.2-201ENST00000637380 353 ntBASIC1.67□□□□□ -2.14
BEST3Q8N1M1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
BEST3Q8N1M1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
BEST3Q8N1M1 RNU6-801P-201ENST00000364087 105 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 Y_RNA.288-201ENST00000364854 92 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 SNORA4.2-201ENST00000365313 147 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
BEST3Q8N1M1 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AL627390.1-201ENST00000396055 340 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.66□□□□□ -2.14
BEST3Q8N1M1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AC233266.1-201ENST00000454518 96 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 RNA5SP458-201ENST00000516188 119 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 SNORA25.15-201ENST00000516487 89 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 MIR4709-201ENST00000577272 72 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 SNORA28-201ENST00000606769 126 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AC242852.1-201ENST00000612151 96 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AL078604.3-201ENST00000615580 211 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 U4.1-201ENST00000620349 87 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AC244015.1-201ENST00000622301 99 ntBASIC1.66□□□□□ -2.14
BEST3Q8N1M1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.66□□□□□ -2.14
BEST3Q8N1M1 AC100821.1-201ENST00000523153 2479 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 437.4 ms