Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.99□□□□□ -2.25
SKA3Q8IX90 AL133373.1-201ENST00000497098 94 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 RNU7-12P-201ENST00000516030 62 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 RNU6-976P-201ENST00000516086 111 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 RNU4-77P-201ENST00000516692 156 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 RN7SKP295-201ENST00000517264 153 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 MIR5188-201ENST00000583467 113 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 AL359821.1-201ENST00000605519 182 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 AC004832.4-201ENST00000608952 331 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 AL138825.1-201ENST00000618587 192 ntBASIC0.99□□□□□ -2.25
SKA3Q8IX90 Y_RNA.172-201ENST00000363765 102 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 Y_RNA.252-201ENST00000364556 101 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 Y_RNA.315-201ENST00000365117 102 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 RNU6-53P-201ENST00000365367 106 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 RPL23AP36-201ENST00000413895 458 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.98□□□□□ -2.25
SKA3Q8IX90 AC092473.1-201ENST00000441098 221 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.98□□□□□ -2.25
SKA3Q8IX90 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 RNU6-1116P-201ENST00000517269 99 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 MIR4795-201ENST00000584182 89 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 AL117336.2-201ENST00000602435 335 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 AL513534.2-201ENST00000603836 250 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 AC022441.3-201ENST00000605737 136 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.98□□□□□ -2.25
SKA3Q8IX90 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SKA3Q8IX90 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
SKA3Q8IX90 SNORD68-201ENST00000363214 84 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 Y_RNA.338-201ENST00000365320 114 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 Y_RNA.579-201ENST00000390939 94 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AL451046.2-201ENST00000403074 277 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 MTND1P14-201ENST00000427400 950 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AL160004.2-201ENST00000432935 350 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AC104332.1-201ENST00000440471 797 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 Z98949.2-201ENST00000440996 144 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AC005042.3-201ENST00000453230 174 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 Y_RNA.638-201ENST00000459374 113 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AL117351.2-201ENST00000513571 157 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 RNU6-322P-201ENST00000516010 103 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 RNU6-436P-201ENST00000516171 114 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AC090049.2-201ENST00000550377 109 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AC120024.3-201ENST00000603167 156 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AL591926.4-201ENST00000616895 298 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 AL606534.2-204ENST00000635008 178 ntBASIC0.97□□□□□ -2.25
SKA3Q8IX90 Y_RNA.5-201ENST00000362334 102 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 RNU1-115P-201ENST00000365329 160 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 MIR653-201ENST00000385279 96 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 MT-TD-201ENST00000387419 68 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 RNU6-855P-201ENST00000410395 104 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 AC005840.1-201ENST00000498412 377 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 CYCTP-201ENST00000504253 315 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 MIR4423-201ENST00000580922 80 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 RPS29P30-201ENST00000600975 111 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 Y_RNA.772-201ENST00000606692 102 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 SNORD58B-201ENST00000607313 66 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 GHRLOS.1-201ENST00000610995 70 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
SKA3Q8IX90 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.96□□□□□ -2.26
SKA3Q8IX90 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SKA3Q8IX90 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 Y_RNA.329-201ENST00000365209 107 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 Y_RNA.331-201ENST00000365267 102 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 RNU6-163P-201ENST00000384396 106 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 RNY1P14-201ENST00000384426 108 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 RNU6-1105P-201ENST00000384774 107 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 MIR891A-201ENST00000401237 79 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 PIGPP3-201ENST00000425307 415 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 RPS20P10-201ENST00000451209 253 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 TRMT112P2-201ENST00000512910 132 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 SNORA31.2-201ENST00000516019 134 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 SNORD111.1-201ENST00000516421 86 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 SNORA40.14-201ENST00000516543 86 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.95□□□□□ -2.26
SKA3Q8IX90 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.95□□□□□ -2.26
SKA3Q8IX90 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 AC010205.1-201ENST00000616668 449 ntBASIC0.95□□□□□ -2.26
SKA3Q8IX90 RNU6-833P-201ENST00000363486 107 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 RNU6-392P-201ENST00000364926 101 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 SNORA2.2-201ENST00000365473 135 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 Y_RNA.458-201ENST00000384240 102 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 MIR526A1-201ENST00000384897 85 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 RNU6-321P-201ENST00000410912 106 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 MCFD2P1-201ENST00000417812 300 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.94□□□□□ -2.26
SKA3Q8IX90 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
SKA3Q8IX90 AL357312.1-201ENST00000603879 298 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 AL121655.1-201ENST00000605811 308 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
SKA3Q8IX90 AC006157.1-201ENST00000611750 366 ntBASIC0.94□□□□□ -2.26
SKA3Q8IX90 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
SKA3Q8IX90 Y_RNA.80-201ENST00000362996 102 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms