Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-774P-201ENST00000363238 107 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.233-201ENST00000364407 101 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 RNU1-109P-201ENST00000383960 147 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 RNU1-138P-201ENST00000384093 164 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 RNA5SP323-201ENST00000391094 133 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 AL117342.1-201ENST00000404861 406 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 AL603825.1-201ENST00000438481 80 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 RPS4XP11-201ENST00000446897 772 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 RPL36AP21-201ENST00000490372 323 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 AC127455.1-201ENST00000565496 145 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
SFTPA1Q8IWL2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 MIR367-201ENST00000362299 68 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 RNU1-58P-201ENST00000362413 163 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 RNU1-96P-201ENST00000364163 162 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 snoU2_19.4-201ENST00000364329 80 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.571-201ENST00000384753 98 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 MIR597-201ENST00000384968 97 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 MIR626-201ENST00000385032 94 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 U8.13-201ENST00000390842 128 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-1219P-201ENST00000516143 112 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 RNU7-116P-201ENST00000516940 62 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 RNU7-128P-201ENST00000517247 62 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 MIR4724-201ENST00000579485 89 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 AL353149.1-201ENST00000610667 244 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 AL359075.3-201ENST00000613288 217 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 AC080100.1-201ENST00000624239 5356 ntBASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SFTPA1Q8IWL2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 MIR6073-201ENST00000352083 89 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.7-201ENST00000362352 102 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-144P-201ENST00000383951 107 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 SNORA8-201ENST00000384574 139 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-381P-201ENST00000391259 108 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC099677.2-201ENST00000436385 175 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU7-99P-201ENST00000516271 62 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-255P-201ENST00000516957 105 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AL929325.1-201ENST00000603096 117 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 MIR6132-201ENST00000622083 109 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC010297.1-201ENST00000623948 149 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 AC022513.1-201ENST00000624512 117 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 U6.108-201ENST00000637764 58 ntBASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SFTPA1Q8IWL2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 MIR1278-201ENST00000408753 81 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC233266.1-201ENST00000454518 96 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC245047.8-201ENST00000456455 284 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC091021.1-201ENST00000468051 388 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-453P-201ENST00000516819 85 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC011604.1-201ENST00000545978 196 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC242852.1-201ENST00000612151 96 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 AC244015.1-201ENST00000622301 99 ntBASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.182-201ENST00000363880 111 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 SNORA72-201ENST00000384339 132 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-437P-201ENST00000459408 95 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 AL163195.1-201ENST00000496941 348 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 SCARNA8-201ENST00000515924 131 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.662-201ENST00000516028 97 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-1007P-201ENST00000516586 107 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 AL137847.3-201ENST00000611521 109 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 MIR6845-201ENST00000613182 61 ntBASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SFTPA1Q8IWL2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.229-201ENST00000364347 113 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.435-201ENST00000384095 112 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 SNORA80E-201ENST00000384744 137 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 MT-TT-201ENST00000387460 66 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 MIR526A2-201ENST00000390198 65 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 CST2P1-201ENST00000425770 87 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-548P-201ENST00000517083 115 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms