Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 Y_RNA.148-201ENST00000363557 117 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 SNORD115-30-201ENST00000364117 82 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 Y_RNA.216-201ENST00000364205 93 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 Y_RNA.374-201ENST00000365606 101 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 SDAD1P3-201ENST00000427380 333 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 RPS26P55-201ENST00000471178 356 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 SNORA31.10-201ENST00000516482 106 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 RNU6-63P-201ENST00000516690 95 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NPHP3Q7Z494 AC040926.1-201ENST00000530195 238 ntBASIC1.48□□□□□ -2.17
NPHP3Q7Z494 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NPHP3Q7Z494 RNU4-41P-201ENST00000364426 143 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.47□□□□□ -2.17
NPHP3Q7Z494 Y_RNA.446-201ENST00000384178 104 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 RNU6-136P-201ENST00000384663 107 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 Y_RNA.645-201ENST00000391229 102 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 MIR1302-11-201ENST00000408051 138 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 MIR1302-9-201ENST00000408365 138 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 MIR1302-10-201ENST00000408734 138 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 COX6CP10-201ENST00000416832 224 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 MTCO2P12-201ENST00000427426 682 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NPHP3Q7Z494 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.47□□□□□ -2.17
NPHP3Q7Z494 Y_RNA.631-201ENST00000459607 101 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 RNU6-155P-201ENST00000516347 100 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.47□□□□□ -2.17
NPHP3Q7Z494 AC005592.1-201ENST00000566527 1640 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 AL929325.1-201ENST00000603096 117 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 MIR1302-2-201ENST00000607096 138 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 PART1_1.1-201ENST00000611761 217 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 AL138825.1-201ENST00000618587 192 ntBASIC1.47□□□□□ -2.17
NPHP3Q7Z494 SNORD1A-201ENST00000364968 72 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 RNU6-1175P-201ENST00000365200 107 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 SNORD14.1-201ENST00000365609 90 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 SNORA22B-201ENST00000383876 138 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.471-201ENST00000384312 102 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 MIR873-201ENST00000401120 77 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 RNU2-54P-201ENST00000410299 190 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 AC245047.3-201ENST00000429428 127 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.46□□□□□ -2.18
NPHP3Q7Z494 RNU6-1153P-201ENST00000516760 105 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.46□□□□□ -2.18
NPHP3Q7Z494 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.46□□□□□ -2.18
NPHP3Q7Z494 MIR3684-201ENST00000579779 74 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 AC010205.1-201ENST00000616668 449 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 MIR8054-201ENST00000620877 86 ntBASIC1.46□□□□□ -2.18
NPHP3Q7Z494 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.46□□□□□ -2.18
NPHP3Q7Z494 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.28-201ENST00000362554 111 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.128-201ENST00000363391 112 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.143-201ENST00000363520 106 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RNU6-324P-201ENST00000363957 106 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RNU6-450P-201ENST00000364654 107 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RNU6-440P-201ENST00000390882 105 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AL031003.1-201ENST00000404229 172 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RNU6-130P-201ENST00000411112 103 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RPEP5-201ENST00000441137 268 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RNU7-34P-201ENST00000459394 64 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC091021.1-201ENST00000468051 388 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC079140.2-201ENST00000506193 142 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 SNORA25.10-201ENST00000515926 124 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 CYP3A137P-201ENST00000562436 69 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 MIR4709-201ENST00000577272 72 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC006380.1-201ENST00000603598 186 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC104695.3-201ENST00000604052 296 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AL121655.1-201ENST00000605811 308 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.772-201ENST00000606692 102 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC134503.1-201ENST00000633048 54 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NPHP3Q7Z494 AC018630.2-201ENST00000534866 2403 ntBASIC1.45□□□□□ -2.18
NPHP3Q7Z494 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
NPHP3Q7Z494 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.172-201ENST00000363765 102 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.230-201ENST00000364348 109 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 RNU6-117P-201ENST00000365415 107 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.424-201ENST00000384063 103 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 RNU6-937P-201ENST00000384325 106 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 RNU6-505P-201ENST00000384427 107 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.570-201ENST00000384750 101 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
NPHP3Q7Z494 MRPL42P3-201ENST00000401492 326 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 MIR548P-201ENST00000408336 84 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.44□□□□□ -2.18
NPHP3Q7Z494 POLR2J4-204ENST00000418424 324 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 RNU6-436P-201ENST00000516171 114 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 Y_RNA.701-201ENST00000516812 110 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AL160236.1-201ENST00000556317 195 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AC020661.2-201ENST00000560114 134 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 MIR3937-201ENST00000580135 106 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 MIR3171-201ENST00000584270 74 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AL390123.1-201ENST00000603216 237 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AC022441.3-201ENST00000605737 136 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.44□□□□□ -2.18
NPHP3Q7Z494 AC127459.3-201ENST00000624328 466 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms