Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.77□□□□□ -2.13
SHFQ7M4L6 AC069257.2-201ENST00000441819 155 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 RPL23AP63-201ENST00000498752 471 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 RNU6-341P-201ENST00000516973 96 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 RNU6-111P-201ENST00000517179 105 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 AC074050.1-201ENST00000563247 211 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 POLR3GP1-201ENST00000594073 261 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.77□□□□□ -2.13
SHFQ7M4L6 AC013791.1-201ENST00000616619 62 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.77□□□□□ -2.13
SHFQ7M4L6 MIR219B-201ENST00000637023 88 ntBASIC1.77□□□□□ -2.13
SHFQ7M4L6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.77□□□□□ -2.13
SHFQ7M4L6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SHFQ7M4L6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SHFQ7M4L6 AC100821.1-201ENST00000523153 2479 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SHFQ7M4L6 RNU6-899P-201ENST00000363947 107 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 Y_RNA.269-201ENST00000364685 89 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 RNU6-338P-201ENST00000383888 105 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 Y_RNA.489-201ENST00000384410 101 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 RNU11-5P-201ENST00000391216 129 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 RNU7-94P-201ENST00000459576 63 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 SNORA31.17-201ENST00000516953 127 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.76□□□□□ -2.13
SHFQ7M4L6 AC127455.1-201ENST00000565496 145 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 MIR1273D-201ENST00000577266 86 ntBASIC1.76□□□□□ -2.13
SHFQ7M4L6 AC131280.1-202ENST00000624067 4211 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 Y_RNA.65-201ENST00000362846 100 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 SNORA4.2-201ENST00000365313 147 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 SNORA72-201ENST00000384339 132 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 Y_RNA.510-201ENST00000384511 114 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 AC009310.1-201ENST00000414414 451 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.75□□□□□ -2.13
SHFQ7M4L6 SNORD116-28-201ENST00000516123 91 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 RNU7-116P-201ENST00000516940 62 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 AC011604.1-201ENST00000545978 196 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 MIR5692C2-201ENST00000577959 77 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 AC005357.1-201ENST00000588399 301 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 AC011921.3-201ENST00000605540 361 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 AL773524.1-201ENST00000614065 229 ntBASIC1.75□□□□□ -2.13
SHFQ7M4L6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
SHFQ7M4L6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
SHFQ7M4L6 SNORA1B-201ENST00000362535 133 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 Y_RNA.476-201ENST00000384347 108 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 SNORA64-201ENST00000384674 134 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 MIR17-201ENST00000385012 84 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SHFQ7M4L6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 SNORA36B-201ENST00000410438 131 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC233266.1-201ENST00000454518 96 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 RPL23AP54-201ENST00000495129 419 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.74□□□□□ -2.13
SHFQ7M4L6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 SNORA31.10-201ENST00000516482 106 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.74□□□□□ -2.13
SHFQ7M4L6 MIR4287-201ENST00000579398 78 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AL929325.1-201ENST00000603096 117 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC242852.1-201ENST00000612151 96 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AL442067.1-201ENST00000613261 223 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 MIR8054-201ENST00000620877 86 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC244015.1-201ENST00000622301 99 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
SHFQ7M4L6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SHFQ7M4L6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 RNU2-7P-201ENST00000410794 178 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHFQ7M4L6 HSPE1P9-201ENST00000440046 311 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 RNA5SP233-201ENST00000459153 113 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 Y_RNA.638-201ENST00000459374 113 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 RNA5SP57-201ENST00000459463 123 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.73□□□□□ -2.13
SHFQ7M4L6 RNU6-388P-201ENST00000517012 105 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 RNU6-389P-201ENST00000517048 105 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 AC073349.3-201ENST00000617616 186 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 AC078938.1-201ENST00000620993 318 ntBASIC1.73□□□□□ -2.13
SHFQ7M4L6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.72□□□□□ -2.13
SHFQ7M4L6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SHFQ7M4L6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 Y_RNA.292-201ENST00000364904 97 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 MIR562-201ENST00000384894 95 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 SNORA12.1-201ENST00000390873 148 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 RNU6-440P-201ENST00000390882 105 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 RNA5SP425-201ENST00000410336 112 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 AC244636.1-201ENST00000421152 228 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 AL445646.1-201ENST00000431784 216 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.72□□□□□ -2.13
SHFQ7M4L6 AL358944.1-201ENST00000528537 144 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
SHFQ7M4L6 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 470.5 ms