Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC024995.1-201ENST00000523014 93 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 AL929325.1-201ENST00000603096 117 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 AC072026.1-201ENST00000605023 201 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 RNU2-4P-201ENST00000606190 192 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 AC008555.8-201ENST00000623602 2168 ntBASIC2.1□□□□□ -2.07
PTCHD4Q6ZW05 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 AC018630.2-201ENST00000534866 2403 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.7-201ENST00000362352 102 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-682P-201ENST00000363843 106 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 snoU2_19.4-201ENST00000364329 80 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.233-201ENST00000364407 101 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 Y_RNA.571-201ENST00000384753 98 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 MIR520G-201ENST00000385064 90 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-381P-201ENST00000391259 108 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 Z92545.1-201ENST00000411782 234 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 RPS26P45-201ENST00000471748 340 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 RNU6-1291P-201ENST00000516591 104 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 AC091178.2-201ENST00000584401 117 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 AC046143.2-201ENST00000609789 160 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 MIR6079-201ENST00000635807 62 ntBASIC2.09□□□□□ -2.07
PTCHD4Q6ZW05 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.08
PTCHD4Q6ZW05 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.238-201ENST00000364441 102 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.267-201ENST00000364679 109 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.435-201ENST00000384095 112 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 RNU4-70P-201ENST00000384579 139 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.555-201ENST00000384673 110 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 RNA5SP465-201ENST00000391195 109 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 RNU11-5P-201ENST00000391216 129 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 RPL23AP83-201ENST00000434984 473 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 AC233266.1-201ENST00000454518 96 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 MIR5094-201ENST00000578766 85 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 AC242852.1-201ENST00000612151 96 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 AC244015.1-201ENST00000622301 99 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 AC100821.1-201ENST00000523153 2479 ntBASIC2.08□□□□□ -2.08
PTCHD4Q6ZW05 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 SNORA5B-201ENST00000363786 132 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-886P-201ENST00000384319 105 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MIR483-201ENST00000385070 76 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MIR1278-201ENST00000408753 81 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 RN7SKP51-201ENST00000410781 304 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.621-201ENST00000411065 96 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AC245047.8-201ENST00000456455 284 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AC234781.5-201ENST00000508429 271 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MRPS17P9-201ENST00000511924 393 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 RN7SKP164-201ENST00000516138 266 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-1219P-201ENST00000516143 112 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MIR5688-201ENST00000580619 83 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
PTCHD4Q6ZW05 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-674P-201ENST00000363831 107 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.203-201ENST00000364106 102 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.229-201ENST00000364347 113 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNU4-41P-201ENST00000364426 143 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-1080P-201ENST00000383982 107 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 PCNPP3-201ENST00000393579 471 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 AC074198.2-201ENST00000508153 258 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 SCARNA8-201ENST00000515924 131 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNVU1-2-201ENST00000516326 135 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-453P-201ENST00000516819 85 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-341P-201ENST00000516973 96 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 AC069114.2-201ENST00000604699 304 ntBASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PTCHD4Q6ZW05 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.182-201ENST00000363880 111 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 MT-TT-201ENST00000387460 66 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 RNU7-94P-201ENST00000459576 63 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 RNA5SP24-201ENST00000516478 95 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-1007P-201ENST00000516586 107 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 AC084364.2-201ENST00000546924 395 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 AC006023.1-201ENST00000603944 259 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 AC022217.4-201ENST00000604389 163 ntBASIC2.05□□□□□ -2.08
PTCHD4Q6ZW05 Y_RNA.121-201ENST00000363309 113 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 RNU6-1019P-201ENST00000364424 107 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 MIR616-201ENST00000385293 97 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 RNA5SP109-201ENST00000391010 116 ntBASIC2.04□□□□□ -2.08
PTCHD4Q6ZW05 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms