Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 MIR3684-201ENST00000579779 74 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 Z84480.1-201ENST00000605131 311 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AL136370.1-201ENST00000608166 691 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 AC010332.2-201ENST00000613083 1904 ntBASIC-0.77□□□□□ -2.53
CCDC171Q6TFL3 RNU6-280P-201ENST00000364145 104 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 SNORD49B-201ENST00000365172 72 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 RNU6-30P-201ENST00000384561 107 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 RNU6-606P-201ENST00000384721 111 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 MIR521-1-201ENST00000384902 87 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 AL354751.2-201ENST00000415471 210 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 AC073464.1-201ENST00000429823 534 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 AL512286.1-201ENST00000439244 400 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 RNU6-329P-201ENST00000459618 107 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 AC104576.1-201ENST00000524225 88 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 AC121247.2-201ENST00000604776 136 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 RNU1-29P-201ENST00000606574 126 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 MIR4791-201ENST00000607666 84 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.78□□□□□ -2.53
CCDC171Q6TFL3 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 RNU6-159P-201ENST00000391080 106 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 MIR1257-201ENST00000408490 117 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 MCFD2P1-201ENST00000417812 300 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AC090844.1-201ENST00000422019 156 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 Z82188.1-201ENST00000436709 154 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 HMGN2P32-201ENST00000444648 269 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 MTND4P19-201ENST00000446659 478 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AC114755.3-201ENST00000481111 251 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AC010486.3-201ENST00000511602 785 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AC093303.1-201ENST00000514549 295 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 RNA5SP47-201ENST00000517230 109 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 UBL5P4-201ENST00000562584 236 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AC016597.2-201ENST00000613256 341 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AL442067.1-201ENST00000613261 223 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AC009248.2-201ENST00000619826 254 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 AL162726.3-218ENST00000636401 95 ntBASIC-0.79□□□□□ -2.54
CCDC171Q6TFL3 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 RNU6-541P-201ENST00000384709 110 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 U8.17-201ENST00000391292 132 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 AL590002.1-201ENST00000406554 418 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 SNRPGP10-201ENST00000432323 225 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 AC091959.1-201ENST00000495857 238 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 AL137161.1-201ENST00000532231 390 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 CPDP1-201ENST00000579660 283 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 AL158211.2-201ENST00000607282 395 ntBASIC-0.8□□□□□ -2.54
CCDC171Q6TFL3 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 SNORA63C-201ENST00000364578 129 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 RNU6-108P-201ENST00000365558 107 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 RNU6-855P-201ENST00000410395 104 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 RNU2-29P-201ENST00000410423 189 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 AC022306.2-201ENST00000617563 647 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 MIR6740-201ENST00000618268 113 ntBASIC-0.81□□□□□ -2.54
CCDC171Q6TFL3 SNORD115-32-201ENST00000364079 82 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR153-2-201ENST00000385225 87 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR501-201ENST00000390204 84 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR873-201ENST00000401120 77 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 RNU6-325P-201ENST00000411132 105 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MTND2P9-201ENST00000422293 931 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 AC133104.1-201ENST00000429100 218 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 SNORA25.10-201ENST00000515926 124 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR3925-201ENST00000584674 77 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR548AD-201ENST00000584780 82 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR4999-201ENST00000585029 91 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 AC018714.1-201ENST00000605028 208 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 MIR6514-201ENST00000622549 70 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 U6.115-201ENST00000636045 103 ntBASIC-0.82□□□□□ -2.54
CCDC171Q6TFL3 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 SNORD38C-201ENST00000384381 69 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AL008987.1-201ENST00000415528 237 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 RPL30P16-201ENST00000419341 429 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 MIR4263-201ENST00000584745 83 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AC006380.1-201ENST00000603598 186 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AP000811.1-201ENST00000603803 651 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AC096720.1-201ENST00000604441 183 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AL391099.1-201ENST00000624635 187 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 AC006927.3-201ENST00000638789 384 ntBASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.83□□□□□ -2.54
CCDC171Q6TFL3 SNORD50.1-201ENST00000362987 71 ntBASIC-0.84□□□□□ -2.54
CCDC171Q6TFL3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.84□□□□□ -2.54
CCDC171Q6TFL3 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms